Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 OR9A1P-202ENST00000484361 945 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC139272.1-201ENST00000505516 640 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 RNA5SP473-201ENST00000516402 125 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC008429.2-201ENST00000523057 864 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 OR52K3P-201ENST00000531655 943 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 OR4A41P-201ENST00000533053 928 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 RPL41P2-201ENST00000544920 409 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC010333.3-201ENST00000615100 402 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC130448.2-201ENST00000624082 374 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 SNX18P10-201ENST00000625014 519 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 SAMMSON-214ENST00000641395 1264 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC022613.3-201ENST00000560740 1346 ntBASIC7.19□□□□□ -1.26
NXF3Q9H4D5 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NXF3Q9H4D5 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.18□□□□□ -1.26
NXF3Q9H4D5 OOSP1-201ENST00000398992 1270 ntBASIC7.18□□□□□ -1.26
NXF3Q9H4D5 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 AC245452.2-201ENST00000435222 392 ntBASIC7.18□□□□□ -1.26
NXF3Q9H4D5 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.18□□□□□ -1.26
NXF3Q9H4D5 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.18□□□□□ -1.26
NXF3Q9H4D5 PGBD4P1-201ENST00000473644 407 ntBASIC7.18□□□□□ -1.26
NXF3Q9H4D5 AC117394.1-201ENST00000477323 567 ntBASIC7.18□□□□□ -1.26
NXF3Q9H4D5 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 RN7SL366P-201ENST00000577957 292 ntBASIC7.18□□□□□ -1.26
NXF3Q9H4D5 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 AC004805.3-201ENST00000603178 310 ntBASIC7.18□□□□□ -1.26
NXF3Q9H4D5 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
NXF3Q9H4D5 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NXF3Q9H4D5 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms