Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF525-203ENST00000475179 1868 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 PLS3-AS1-202ENST00000607680 1763 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 MAK-201ENST00000313243 3984 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 TFDP3-201ENST00000310125 1680 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
USB1Q9BQ65 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USB1Q9BQ65 AL136298.2-201ENST00000556497 1570 ntBASIC8.14□□□□□ -1.11
USB1Q9BQ65 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC066616.2-201ENST00000559334 1481 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 Z83847.1-201ENST00000569912 1463 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 MAPK10-279ENST00000641157 2449 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 BRCA1-219ENST00000491747 2379 ntTSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 CNEP1R1-206ENST00000565556 1707 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC084876.2-201ENST00000624844 1709 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 RNU1-7P-201ENST00000364105 164 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 SNORA71C-201ENST00000364642 134 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 SNORA48.6-201ENST00000391156 130 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 CD160-203ENST00000401557 705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC231533.2-201ENST00000419045 978 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 PDGFC-202ENST00000422544 849 ntTSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 TYROBP-202ENST00000424586 541 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 OR52B5P-201ENST00000435337 951 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 RPSAP17-201ENST00000437336 883 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC012501.2-201ENST00000437634 1281 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC010967.3-201ENST00000438648 213 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 RABEPKP1-201ENST00000440529 1026 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AL365356.2-201ENST00000441526 196 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AL008627.1-201ENST00000446953 486 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 FABP3P2-201ENST00000453169 399 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 FTLP18-201ENST00000453860 523 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 TMED10P2-201ENST00000474255 612 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC048341.1-201ENST00000480482 403 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 RN7SL141P-201ENST00000484215 266 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 RPL34P33-201ENST00000486062 334 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 HMGN2P25-201ENST00000486956 268 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC122714.1-201ENST00000502510 459 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC017013.1-201ENST00000506459 799 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC110768.2-201ENST00000506540 329 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AL645949.1-201ENST00000510094 324 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC110792.2-201ENST00000510278 224 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 APOBEC3B-AS1-201ENST00000513758 691 ntTSL 3 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 WBP1LP2-201ENST00000515260 998 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 ACTBP6-201ENST00000520036 1090 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC105219.3-201ENST00000527579 374 ntTSL 2 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC007424.1-203ENST00000554613 687 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC037471.2-201ENST00000564941 598 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 LGALS9DP-201ENST00000580112 764 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 CD160-204ENST00000584442 219 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC006504.6-201ENST00000590142 199 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 MIR6083-201ENST00000612737 106 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AL158196.1-201ENST00000616786 434 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC040978.1-201ENST00000617244 1282 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 PKP4-218ENST00000629219 162 ntTSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.13□□□□□ -1.11
USB1Q9BQ65 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC092162.3-201ENST00000624511 1624 ntBASIC8.13□□□□□ -1.11
USB1Q9BQ65 AC009831.5-201ENST00000624000 3189 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms