Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC068305.2-201ENST00000550567 1205 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 NTS-203ENST00000551529 801 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 EIF4EBP1P1-201ENST00000557776 341 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AL356055.1-201ENST00000602528 446 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC069209.1-201ENST00000619282 651 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 SNX18P5-201ENST00000619873 868 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC005086.2-201ENST00000624939 228 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 RANBP2-205ENST00000629728 156 ntTSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 BRCC3-210ENST00000630295 954 ntTSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 OR5AK4P-201ENST00000635912 903 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 AC105046.1-201ENST00000566457 4997 ntBASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 LETMD1-228ENST00000550929 1389 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 PSG11-202ENST00000320078 1575 ntAPPRIS P2 TSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
DEPDC4Q8N2C3 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC008498.2-201ENST00000624033 2322 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 SND1-IT1-201ENST00000623342 2481 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 COX17P1-201ENST00000378775 192 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 RNU6-114P-201ENST00000384704 105 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 KRTAP9-1-201ENST00000398470 753 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 BTF3P7-201ENST00000407097 488 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AL023773.2-201ENST00000412173 1005 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 Z98751.1-201ENST00000413827 381 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 CYCSP5-201ENST00000415043 297 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 ELOCP10-201ENST00000440624 327 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 MTND6P21-201ENST00000443620 482 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC073583.1-201ENST00000447553 400 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 RANP1-206ENST00000455094 651 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC104619.1-201ENST00000459634 631 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC138409.2-202ENST00000507274 458 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 RNU6-1004P-201ENST00000516584 111 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 PROSER3-207ENST00000537459 772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 RAN-211ENST00000541679 572 ntTSL 5 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 OR7K1P-201ENST00000546439 926 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC025260.1-201ENST00000548858 430 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC074029.1-201ENST00000552531 1044 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 NPM1P47-201ENST00000560843 856 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 CDRT7-201ENST00000568256 767 ntTSL 3 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC011453.2-201ENST00000603737 729 ntBASIC7.92□□□□□ -1.14
DEPDC4Q8N2C3 AC011416.3-201ENST00000603971 355 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 352.3 ms