Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 Z97832.2-201ENST00000605896 4261 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 AC084782.1-201ENST00000564401 2465 ntBASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 CREM-208ENST00000361599 2170 ntTSL 5 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC9.74□□□□□ -0.85
CDC42BPAQ5VT25 RN7SKP69-201ENST00000365390 305 ntBASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 PPCS-201ENST00000372556 984 ntTSL 2 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AC017035.1-201ENST00000411999 1115 ntBASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 RPL6P30-201ENST00000443382 862 ntBASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 NXT1P1-201ENST00000458481 316 ntBASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AC005332.4-201ENST00000592752 579 ntBASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 SNORD16-201ENST00000362803 99 ntBASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 RN7SL193P-201ENST00000491708 276 ntBASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 TPRX1P1-201ENST00000557620 319 ntBASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 AC026124.2-201ENST00000621847 656 ntBASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
CDC42BPAQ5VT25 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 RN7SKP229-201ENST00000410465 302 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 AC130360.1-201ENST00000425489 1117 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 SEPHS1P4-201ENST00000446112 1176 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 RN7SL177P-201ENST00000476596 299 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 RN7SL714P-201ENST00000487050 298 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 RN7SL561P-201ENST00000488553 281 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 AC115837.1-201ENST00000517662 1001 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 AC130365.2-201ENST00000525882 1201 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 AC092375.1-201ENST00000550410 637 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 AC109309.2-201ENST00000612597 332 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 CASC19-228ENST00000641414 1684 ntBASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CDC42BPAQ5VT25 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 AC087752.1-201ENST00000391360 558 ntBASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 ZSCAN12P1-201ENST00000406489 419 ntBASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 AL157884.1-201ENST00000424561 454 ntBASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 AC023141.3-201ENST00000436698 278 ntBASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 AL645936.1-201ENST00000441979 518 ntBASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 OR7A15P-201ENST00000449848 1009 ntBASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 AL158068.1-201ENST00000506116 616 ntBASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC9.71□□□□□ -0.85
CDC42BPAQ5VT25 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 300.7 ms