Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.68□□□□□ -1.18
CCNA1P78396 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.68□□□□□ -1.18
CCNA1P78396 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
CCNA1P78396 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.68□□□□□ -1.18
CCNA1P78396 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 SNORA70.3-201ENST00000365075 132 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 RNU1-84P-201ENST00000365447 164 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 RNA5SP198-201ENST00000410376 127 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 RPS7P12-201ENST00000422385 582 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 AC239367.3-201ENST00000428996 814 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CCNA1P78396 RN7SL382P-201ENST00000482631 282 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 RN7SL569P-201ENST00000494652 288 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.68□□□□□ -1.18
CCNA1P78396 AC090568.1-201ENST00000509499 856 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.68□□□□□ -1.18
CCNA1P78396 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.68□□□□□ -1.18
CCNA1P78396 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.68□□□□□ -1.18
CCNA1P78396 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.68□□□□□ -1.18
CCNA1P78396 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.68□□□□□ -1.18
CCNA1P78396 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.68□□□□□ -1.18
CCNA1P78396 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 MIR4502-201ENST00000580432 81 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 CTSLP2-201ENST00000580501 394 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 AC025262.3-201ENST00000623666 360 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 AC015871.4-201ENST00000624650 2260 ntBASIC7.68□□□□□ -1.18
CCNA1P78396 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.68□□□□□ -1.18
CCNA1P78396 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCNA1P78396 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.67□□□□□ -1.18
CCNA1P78396 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCNA1P78396 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CCNA1P78396 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.67□□□□□ -1.18
CCNA1P78396 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCNA1P78396 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCNA1P78396 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 RNA5SP122-201ENST00000384457 108 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 YWHAZP6-201ENST00000399764 738 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CCNA1P78396 RN7SKP240-201ENST00000410583 375 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.67□□□□□ -1.18
CCNA1P78396 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CCNA1P78396 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.67□□□□□ -1.18
CCNA1P78396 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.67□□□□□ -1.18
CCNA1P78396 ULK4P1-202ENST00000565174 503 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 AC002519.2-203ENST00000567043 837 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 AC005726.4-201ENST00000582858 458 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 AC087575.1-201ENST00000585087 229 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 AL589863.1-201ENST00000595383 631 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 DYNLL1P1-201ENST00000595442 269 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 AL359742.1-201ENST00000622497 540 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 AC022400.9-201ENST00000623633 273 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.67□□□□□ -1.18
CCNA1P78396 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.67□□□□□ -1.18
CCNA1P78396 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.67□□□□□ -1.18
CCNA1P78396 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.67□□□□□ -1.18
CCNA1P78396 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCNA1P78396 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCNA1P78396 AL359922.2-201ENST00000581788 3017 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.67□□□□□ -1.18
CCNA1P78396 Z99129.4-201ENST00000624649 2435 ntBASIC7.67□□□□□ -1.18
CCNA1P78396 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCNA1P78396 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCNA1P78396 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.67□□□□□ -1.18
CCNA1P78396 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.67□□□□□ -1.18
CCNA1P78396 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.66□□□□□ -1.18
CCNA1P78396 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.66□□□□□ -1.18
CCNA1P78396 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CCNA1P78396 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.66□□□□□ -1.18
CCNA1P78396 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.66□□□□□ -1.18
CCNA1P78396 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 MIR188-201ENST00000385034 86 ntBASIC7.66□□□□□ -1.18
CCNA1P78396 FTH1P20-201ENST00000434913 548 ntBASIC7.66□□□□□ -1.18
CCNA1P78396 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.66□□□□□ -1.18
CCNA1P78396 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.66□□□□□ -1.18
CCNA1P78396 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.66□□□□□ -1.18
CCNA1P78396 CYCSP25-201ENST00000525280 316 ntBASIC7.66□□□□□ -1.18
CCNA1P78396 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.66□□□□□ -1.18
CCNA1P78396 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.66□□□□□ -1.18
CCNA1P78396 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CCNA1P78396 AL135999.3-201ENST00000610501 812 ntBASIC7.66□□□□□ -1.18
CCNA1P78396 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms