Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX3P41225 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.33□□□□□ -1.4
SOX3P41225 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX3P41225 AC083806.2-201ENST00000617795 2685 ntBASIC6.32□□□□□ -1.4
SOX3P41225 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 MAPK10-379ENST00000642013 1385 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AL139384.2-201ENST00000613809 3590 ntBASIC6.32□□□□□ -1.4
SOX3P41225 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
SOX3P41225 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.32□□□□□ -1.4
SOX3P41225 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
SOX3P41225 PPIAP26-201ENST00000377951 522 ntBASIC6.32□□□□□ -1.4
SOX3P41225 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 RN7SKP205-201ENST00000410999 307 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 AC006509.1-201ENST00000420788 634 ntBASIC6.32□□□□□ -1.4
SOX3P41225 ETF1P1-206ENST00000427296 984 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 RN7SKP198-201ENST00000459286 306 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AC083806.1-201ENST00000468934 316 ntBASIC6.32□□□□□ -1.4
SOX3P41225 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 RPS4XP17-201ENST00000479057 754 ntBASIC6.32□□□□□ -1.4
SOX3P41225 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 FTH1P8-201ENST00000498161 514 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AC009567.2-201ENST00000502989 349 ntBASIC6.32□□□□□ -1.4
SOX3P41225 MRPS5P3-201ENST00000515577 166 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AC010442.1-201ENST00000515583 816 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AC093878.1-201ENST00000515630 432 ntBASIC6.32□□□□□ -1.4
SOX3P41225 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 AC087575.1-201ENST00000585087 229 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 RPS4XP21-201ENST00000603814 750 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AL035410.2-201ENST00000604963 864 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AL683813.2-201ENST00000605245 502 ntBASIC6.32□□□□□ -1.4
SOX3P41225 AC004908.1-201ENST00000606572 541 ntBASIC6.32□□□□□ -1.4
SOX3P41225 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SOX3P41225 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 AL391261.1-201ENST00000555712 1479 ntBASIC6.32□□□□□ -1.4
SOX3P41225 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX3P41225 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX3P41225 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX3P41225 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX3P41225 CCDC150P1-201ENST00000537123 2215 ntBASIC6.31□□□□□ -1.4
SOX3P41225 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX3P41225 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX3P41225 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SOX3P41225 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX3P41225 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX3P41225 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX3P41225 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX3P41225 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX3P41225 AC079248.1-201ENST00000427568 1546 ntBASIC6.31□□□□□ -1.4
SOX3P41225 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX3P41225 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX3P41225 AC005618.1-201ENST00000606901 3148 ntBASIC6.31□□□□□ -1.4
SOX3P41225 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX3P41225 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SOX3P41225 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX3P41225 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SOX3P41225 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX3P41225 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
SOX3P41225 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms