Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC003989.1-201ENST00000434569 565 ntBASIC6.34□□□□□ -1.39
COL5A1P20908 AMYP1-201ENST00000440059 1023 ntBASIC6.34□□□□□ -1.39
COL5A1P20908 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.34□□□□□ -1.39
COL5A1P20908 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.34□□□□□ -1.39
COL5A1P20908 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.34□□□□□ -1.39
COL5A1P20908 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.34□□□□□ -1.39
COL5A1P20908 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 AC008507.3-201ENST00000585753 472 ntBASIC6.34□□□□□ -1.39
COL5A1P20908 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.34□□□□□ -1.39
COL5A1P20908 AL356986.1-201ENST00000604085 341 ntBASIC6.34□□□□□ -1.39
COL5A1P20908 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.34□□□□□ -1.39
COL5A1P20908 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.34□□□□□ -1.39
COL5A1P20908 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.34□□□□□ -1.39
COL5A1P20908 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.34□□□□□ -1.39
COL5A1P20908 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL5A1P20908 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
COL5A1P20908 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.34□□□□□ -1.39
COL5A1P20908 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
COL5A1P20908 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.34□□□□□ -1.39
COL5A1P20908 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC6.34□□□□□ -1.39
COL5A1P20908 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 LRRC37A6P-202ENST00000448648 5444 ntBASIC6.34□□□□□ -1.39
COL5A1P20908 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL5A1P20908 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
COL5A1P20908 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.34□□□□□ -1.4
COL5A1P20908 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
COL5A1P20908 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 AC079355.1-201ENST00000421770 223 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 CYP4F32P-201ENST00000426492 504 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.34□□□□□ -1.4
COL5A1P20908 AC112492.2-201ENST00000432774 1030 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 MORF4L1P5-201ENST00000433352 961 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.34□□□□□ -1.4
COL5A1P20908 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.34□□□□□ -1.4
COL5A1P20908 AC097463.1-201ENST00000447288 481 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 RPL19P11-201ENST00000495944 589 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.34□□□□□ -1.4
COL5A1P20908 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
COL5A1P20908 AC079905.1-201ENST00000549280 475 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 CYCSP38-201ENST00000559840 322 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 AP005136.2-201ENST00000583253 1049 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.34□□□□□ -1.4
COL5A1P20908 AC013244.1-201ENST00000604279 193 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 SNORA74.4-201ENST00000607595 199 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 AC010333.3-201ENST00000615100 402 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 MIR8089-201ENST00000620165 82 ntBASIC6.34□□□□□ -1.4
COL5A1P20908 AC009166.2-201ENST00000624410 2833 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC6.33□□□□□ -1.4
COL5A1P20908 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL5A1P20908 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.33□□□□□ -1.4
COL5A1P20908 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL5A1P20908 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL5A1P20908 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL5A1P20908 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL5A1P20908 RARSP1-201ENST00000542842 1418 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL5A1P20908 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL5A1P20908 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.33□□□□□ -1.4
COL5A1P20908 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.33□□□□□ -1.4
COL5A1P20908 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL5A1P20908 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.33□□□□□ -1.4
COL5A1P20908 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL5A1P20908 AC105342.1-201ENST00000378334 6848 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL5A1P20908 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL5A1P20908 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL5A1P20908 RN7SKP278-201ENST00000410504 342 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 RN7SKP144-201ENST00000411108 279 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL5A1P20908 RPS3P2-201ENST00000421346 701 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 AC239367.3-201ENST00000428996 814 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.33□□□□□ -1.4
COL5A1P20908 EMC3-AS1-205ENST00000438698 534 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.33□□□□□ -1.4
COL5A1P20908 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
COL5A1P20908 RN7SL382P-201ENST00000482631 282 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 AC025458.1-201ENST00000506046 166 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 RN7SKP35-201ENST00000517210 151 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.33□□□□□ -1.4
COL5A1P20908 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.33□□□□□ -1.4
COL5A1P20908 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.33□□□□□ -1.4
COL5A1P20908 LINC00556-201ENST00000569603 412 ntBASIC6.33□□□□□ -1.4
COL5A1P20908 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.33□□□□□ -1.4
COL5A1P20908 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms