Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HMGA1P17096 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGA1P17096 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 NEK2P4-201ENST00000425793 1329 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 AL512310.3-201ENST00000547023 1335 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGA1P17096 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGA1P17096 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 AC002127.1-201ENST00000421305 225 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGA1P17096 AC091390.2-201ENST00000432573 374 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGA1P17096 AC021006.1-201ENST00000489849 553 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.84□□□□□ -1.31
HMGA1P17096 AC113367.2-201ENST00000505749 160 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGA1P17096 AL078601.3-201ENST00000573303 535 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGA1P17096 AC134669.1-201ENST00000581275 672 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGA1P17096 AL157899.1-201ENST00000604110 936 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.84□□□□□ -1.31
HMGA1P17096 TSHZ2-205ENST00000626626 670 ntBASIC6.84□□□□□ -1.31
HMGA1P17096 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGA1P17096 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.84□□□□□ -1.31
HMGA1P17096 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HMGA1P17096 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGA1P17096 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGA1P17096 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGA1P17096 TMCC1P1-201ENST00000518897 1980 ntBASIC6.84□□□□□ -1.32
HMGA1P17096 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HMGA1P17096 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HMGA1P17096 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HMGA1P17096 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
HMGA1P17096 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.84□□□□□ -1.32
HMGA1P17096 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
HMGA1P17096 AC119674.1-204ENST00000641348 1343 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGA1P17096 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 RPL11P4-201ENST00000332269 436 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 AL391419.1-201ENST00000398901 1275 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 YWHAZP6-201ENST00000399764 738 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AC017035.1-201ENST00000411999 1115 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AC096537.2-201ENST00000413707 714 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 MED28P4-201ENST00000433137 572 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGA1P17096 POU5F1P5-201ENST00000445059 658 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGA1P17096 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 GM2AP2-201ENST00000491764 562 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AC063943.2-201ENST00000495697 534 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AC139272.1-201ENST00000505516 640 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGA1P17096 AC131392.1-201ENST00000506490 633 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AC024451.1-201ENST00000508013 779 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 HSD3BP3-201ENST00000514706 994 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 RNA5SP418-201ENST00000515951 117 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGA1P17096 AC008055.1-201ENST00000547032 609 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGA1P17096 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGA1P17096 AL135999.3-201ENST00000610501 812 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AL109924.4-201ENST00000623089 670 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGA1P17096 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGA1P17096 AC023245.2-201ENST00000530760 2978 ntBASIC6.83□□□□□ -1.32
HMGA1P17096 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGA1P17096 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGA1P17096 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms