Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL1P09341 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.09□□□□□ -1.59
CXCL1P09341 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL1P09341 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.09□□□□□ -1.59
CXCL1P09341 AC114801.1-201ENST00000512633 297 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.09□□□□□ -1.59
CXCL1P09341 RNA5SP422-201ENST00000516778 111 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.09□□□□□ -1.59
CXCL1P09341 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC5.09□□□□□ -1.59
CXCL1P09341 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.09□□□□□ -1.59
CXCL1P09341 AC079866.1-201ENST00000534985 1220 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL1P09341 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL1P09341 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC5.09□□□□□ -1.59
CXCL1P09341 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.09□□□□□ -1.59
CXCL1P09341 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC5.09□□□□□ -1.59
CXCL1P09341 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC5.09□□□□□ -1.59
CXCL1P09341 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CXCL1P09341 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.09□□□□□ -1.59
CXCL1P09341 MIR4470-201ENST00000583453 72 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 OR7E94P-202ENST00000601375 790 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 AC025857.2-201ENST00000602711 238 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 AC108451.2-201ENST00000603875 538 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 MIR6751-201ENST00000610479 63 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 AC025287.2-201ENST00000621911 668 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL1P09341 AL121768.1-201ENST00000613917 2544 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CXCL1P09341 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL1P09341 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
CXCL1P09341 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL1P09341 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CXCL1P09341 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CXCL1P09341 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CXCL1P09341 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CXCL1P09341 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.09□□□□□ -1.6
CXCL1P09341 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CXCL1P09341 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CXCL1P09341 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.09□□□□□ -1.6
CXCL1P09341 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL1P09341 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL1P09341 AC062022.1-201ENST00000451026 1684 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 SHQ1P1-201ENST00000437111 1544 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CXCL1P09341 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
CXCL1P09341 CREM-218ENST00000460270 1416 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 AC004656.1-201ENST00000568479 4951 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL1P09341 GTF2IP4-201ENST00000453092 2054 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 RNU1-21P-201ENST00000363327 163 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CXCL1P09341 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCL1P09341 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCL1P09341 AC068137.1-201ENST00000429272 584 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 AL365220.1-201ENST00000432923 399 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 LSM3P3-201ENST00000436601 306 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 AP006193.1-201ENST00000440724 485 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 AC096915.1-201ENST00000456185 512 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 RN7SL552P-201ENST00000462094 276 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 RN7SL791P-201ENST00000467868 295 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC5.08□□□□□ -1.6
CXCL1P09341 AC139713.1-202ENST00000512366 460 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC5.08□□□□□ -1.6
CXCL1P09341 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 AC136777.2-201ENST00000522979 358 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CXCL1P09341 COX6CP11-201ENST00000555293 229 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 MIR4266-201ENST00000583300 55 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCL1P09341 AC125494.2-201ENST00000602431 657 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 AP001554.1-201ENST00000604533 376 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 AC023310.4-201ENST00000613130 650 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 AC110769.3-201ENST00000624567 1173 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CXCL1P09341 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 Z97989.1-201ENST00000531702 2421 ntBASIC5.08□□□□□ -1.6
CXCL1P09341 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCL1P09341 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL1P09341 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL1P09341 AC022325.1-201ENST00000502748 2199 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms