Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC008507.3-201ENST00000585753 472 ntBASIC8.35□□□□□ -1.07
SCN11AQ9UI33 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 AC073046.2-201ENST00000604756 527 ntBASIC8.35□□□□□ -1.07
SCN11AQ9UI33 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 RN7SL561P-201ENST00000488553 281 ntBASIC8.35□□□□□ -1.07
SCN11AQ9UI33 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 KHDC1P1-201ENST00000511053 508 ntBASIC8.35□□□□□ -1.07
SCN11AQ9UI33 AC108103.1-201ENST00000511286 446 ntBASIC8.35□□□□□ -1.07
SCN11AQ9UI33 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 AL096712.1-201ENST00000614561 159 ntBASIC8.35□□□□□ -1.07
SCN11AQ9UI33 FAM27E2-201ENST00000619668 403 ntBASIC8.35□□□□□ -1.07
SCN11AQ9UI33 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCN11AQ9UI33 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.34□□□□□ -1.07
SCN11AQ9UI33 AC119674.1-204ENST00000641348 1343 ntBASIC8.34□□□□□ -1.07
SCN11AQ9UI33 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 AMYP1-201ENST00000440059 1023 ntBASIC8.34□□□□□ -1.07
SCN11AQ9UI33 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 OR2L9P-201ENST00000444456 913 ntBASIC8.34□□□□□ -1.07
SCN11AQ9UI33 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 RN7SL104P-201ENST00000498686 293 ntBASIC8.34□□□□□ -1.07
SCN11AQ9UI33 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 MIR3614-201ENST00000581261 86 ntBASIC8.34□□□□□ -1.07
SCN11AQ9UI33 MIR4443-201ENST00000585052 53 ntBASIC8.34□□□□□ -1.07
SCN11AQ9UI33 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.34□□□□□ -1.07
SCN11AQ9UI33 AC125238.2-201ENST00000430003 1440 ntBASIC8.34□□□□□ -1.08
SCN11AQ9UI33 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.34□□□□□ -1.08
SCN11AQ9UI33 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.34□□□□□ -1.08
SCN11AQ9UI33 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
SCN11AQ9UI33 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
SCN11AQ9UI33 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 LPAL2-203ENST00000454031 2498 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 CASC19-228ENST00000641414 1684 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AC097463.1-201ENST00000447288 481 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 PRMT5P1-201ENST00000514351 598 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AC023968.1-201ENST00000560719 475 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AC012146.2-201ENST00000576545 416 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 SNORA74.4-201ENST00000607595 199 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 AL512652.1-201ENST00000619006 500 ntBASIC8.33□□□□□ -1.08
SCN11AQ9UI33 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCN11AQ9UI33 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms