Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LRCH3Q96II8 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC9.18□□□□□ -0.94
LRCH3Q96II8 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LRCH3Q96II8 C1orf116-202ENST00000461135 3142 ntTSL 2 BASIC9.18□□□□□ -0.94
LRCH3Q96II8 ANKS1B-213ENST00000549025 2973 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LRCH3Q96II8 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
LRCH3Q96II8 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LRCH3Q96II8 VIT-208ENST00000497382 2650 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
LRCH3Q96II8 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 GBP2-201ENST00000370466 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 ADAMTS12-201ENST00000352040 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC117945.2-201ENST00000642109 1521 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC092111.2-201ENST00000611627 1414 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC021491.4-201ENST00000620769 2573 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 RNU4-79P-201ENST00000362764 141 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 RN7SKP63-201ENST00000363187 301 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 OR1L1-202ENST00000373686 1083 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 RNU6-738P-201ENST00000384531 106 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 RN7SKP221-201ENST00000410420 301 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 RN7SKP131-201ENST00000410698 301 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 RPS15AP38-201ENST00000413110 372 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC093107.1-201ENST00000422772 609 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 AL512649.1-201ENST00000428997 581 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AL049733.1-201ENST00000440178 603 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 PSPHP1-201ENST00000450062 261 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 USP9YP12-201ENST00000450481 570 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 OR52Y1P-201ENST00000452418 828 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 CREM-224ENST00000468236 582 ntTSL 3 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 RPS10P28-201ENST00000480396 498 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 PGAM1P9-201ENST00000503887 755 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC026427.2-201ENST00000506228 536 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 MTCO3P15-201ENST00000526563 574 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 OR4A12P-201ENST00000530847 918 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 NPIPP1-203ENST00000547107 1071 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 HTR1DP1-201ENST00000616500 888 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC138649.3-201ENST00000622154 254 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 LINC02363-201ENST00000317596 2153 ntTSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 AL022323.3-201ENST00000623888 5388 ntBASIC9.17□□□□□ -0.94
LRCH3Q96II8 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 LRTOMT-222ENST00000615940 1895 ntTSL 5 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC9.17□□□□□ -0.94
LRCH3Q96II8 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LRCH3Q96II8 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC079178.2-201ENST00000439323 1624 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 UNC5D-205ENST00000449677 2448 ntTSL 2 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 CEACAM5-201ENST00000221992 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 RBPJP6-201ENST00000411556 1431 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 PHACTR2P1-201ENST00000605639 1414 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 RAB5CP1-201ENST00000395972 580 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 MORF4L1P1-201ENST00000404582 967 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms