Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 Y_RNA.162-201ENST00000363683 102 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 SNORA58.1-201ENST00000364133 136 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 Y_RNA.263-201ENST00000364659 114 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.72□□□□□ -1.01
HLA-CQ95604 ACBD5-204ENST00000375905 3848 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
HLA-CQ95604 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 RNA5SP80-201ENST00000410475 111 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 RN7SKP236-201ENST00000410635 284 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 SNX18P13-201ENST00000412442 529 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-CQ95604 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-CQ95604 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
HLA-CQ95604 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-CQ95604 PIGCP2-201ENST00000433617 835 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 NDUFA5P4-201ENST00000436704 385 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 CYP2C56P-201ENST00000440076 291 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-CQ95604 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC8.72□□□□□ -1.01
HLA-CQ95604 AC069213.3-201ENST00000454858 474 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 AL109809.3-201ENST00000456875 246 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 RPL5P24-201ENST00000463742 885 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 RN7SKP241-201ENST00000464584 291 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 MTND1P16-201ENST00000465177 898 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 RN7SL145P-201ENST00000469955 296 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 MTND6P6-201ENST00000478031 263 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 AC084017.1-201ENST00000483240 860 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 AC008638.2-201ENST00000503840 715 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-CQ95604 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-CQ95604 AC010342.1-201ENST00000514047 877 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-CQ95604 IGLV10-67-201ENST00000519446 325 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-CQ95604 KCTD9P4-201ENST00000526766 1166 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC8.72□□□□□ -1.01
HLA-CQ95604 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.72□□□□□ -1.01
HLA-CQ95604 BMS1P7-201ENST00000602440 1052 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 AL049634.3-201ENST00000604968 457 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 AL592494.3-201ENST00000609485 464 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 AC243772.3-202ENST00000609662 1148 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 AL135999.3-201ENST00000610501 812 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-CQ95604 BX005040.2-201ENST00000620504 370 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 VPS8-228ENST00000628962 207 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-CQ95604 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-CQ95604 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 RPL12P38-202ENST00000588627 2319 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-CQ95604 HCRTR2-201ENST00000370862 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-CQ95604 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.72□□□□□ -1.01
HLA-CQ95604 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-CQ95604 HSP90B3P-201ENST00000415545 1567 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-CQ95604 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 AC138393.1-206ENST00000540997 1886 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-CQ95604 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC8.72□□□□□ -1.01
HLA-CQ95604 EEF1A1P3-201ENST00000417549 1385 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 AL591543.1-202ENST00000642095 4149 ntBASIC8.72□□□□□ -1.01
HLA-CQ95604 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-CQ95604 SEC16B-201ENST00000308284 3985 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
HLA-CQ95604 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
HLA-CQ95604 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
HLA-CQ95604 MOGAT2-203ENST00000526712 3204 ntTSL 2 BASIC8.71□□□□□ -1.01
HLA-CQ95604 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
HLA-CQ95604 HAL-203ENST00000541929 3846 ntTSL 2 BASIC8.71□□□□□ -1.01
HLA-CQ95604 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.71□□□□□ -1.01
HLA-CQ95604 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
HLA-CQ95604 NTNG2-201ENST00000372179 3984 ntTSL 5 BASIC8.71□□□□□ -1.01
HLA-CQ95604 AL133492.1-201ENST00000617854 3955 ntBASIC8.71□□□□□ -1.01
HLA-CQ95604 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
HLA-CQ95604 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
HLA-CQ95604 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.71□□□□□ -1.01
HLA-CQ95604 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.71□□□□□ -1.01
HLA-CQ95604 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC8.71□□□□□ -1.01
HLA-CQ95604 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
HLA-CQ95604 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC8.71□□□□□ -1.02
HLA-CQ95604 ZBTB8OSP1-201ENST00000342688 498 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
HLA-CQ95604 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 C1DP2-201ENST00000418167 426 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 NANOGP4-201ENST00000427230 913 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 AC239800.1-201ENST00000442049 719 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 RPSAP49-201ENST00000445182 886 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 Z99127.3-201ENST00000448158 395 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC8.71□□□□□ -1.02
HLA-CQ95604 AL606490.6-201ENST00000453735 523 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 VPS26AP1-201ENST00000483197 979 ntBASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms