Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 VDAC1P6-201ENST00000430062 855 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC093270.2-201ENST00000486157 792 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC022206.1-201ENST00000495947 347 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC015802.2-201ENST00000589690 189 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 uc_338.18-201ENST00000615451 175 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 SLC30A9-201ENST00000264451 6218 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 RBMY2KP-201ENST00000418221 992 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 CYCSP52-201ENST00000422857 310 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 Z68868.1-201ENST00000429048 544 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 FMO7P-201ENST00000436045 768 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 RN7SL466P-201ENST00000497546 295 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AL035422.2-201ENST00000603059 565 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC010333.3-201ENST00000615100 402 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AL034399.1-201ENST00000451535 380 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 IGHV4-55-201ENST00000520889 368 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC092681.3-201ENST00000609463 678 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AP001541.1-201ENST00000623322 1904 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC009948.5-201ENST00000624360 4406 ntBASIC5.17□□□□□ -1.58
VPS13CQ709C8 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS13CQ709C8 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS13CQ709C8 AC005332.9-201ENST00000620266 2921 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC012075.1-201ENST00000436549 580 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 AL672167.3-201ENST00000465951 960 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 RPA2P1-201ENST00000556557 721 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 ARID1B-230ENST00000637810 5073 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 PDZK1P1-202ENST00000425209 1350 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 AC023141.3-201ENST00000436698 278 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 RPS26P41-201ENST00000450370 284 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 IGHV3-57-201ENST00000520143 280 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 IGLV2-28-201ENST00000520681 304 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 MIR193BHG-214ENST00000641765 509 ntBASIC5.16□□□□□ -1.58
VPS13CQ709C8 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS13CQ709C8 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS13CQ709C8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms