Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RPS10P14-201ENST00000440748 502 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 RPS19P6-201ENST00000441327 433 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 E2F6P3-201ENST00000441743 743 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 MTCO1P55-201ENST00000489829 745 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3AP84243 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 RNA5SP96-201ENST00000516041 107 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC106785.4-201ENST00000569492 412 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.04□□□□□ -1.44
H3F3AP84243 RPS4XP21-201ENST00000603814 750 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 CYCSP1-201ENST00000604815 315 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AC006328.2-201ENST00000623198 397 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AC012005.2-201ENST00000624333 397 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AP000577.1-201ENST00000624366 878 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AC061999.1-201ENST00000624454 177 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 AL359195.2-201ENST00000623657 4412 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 AC010329.1-201ENST00000593903 8328 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
H3F3AP84243 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.04□□□□□ -1.44
H3F3AP84243 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 AC122713.2-201ENST00000624942 3335 ntBASIC6.04□□□□□ -1.44
H3F3AP84243 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3F3AP84243 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3AP84243 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
H3F3AP84243 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
H3F3AP84243 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 TATDN2P3-201ENST00000452855 3665 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
H3F3AP84243 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
H3F3AP84243 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
H3F3AP84243 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3AP84243 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 AC000089.1-201ENST00000424559 801 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3AP84243 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3AP84243 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3AP84243 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3AP84243 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 GAPDHP20-201ENST00000444107 1007 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 AL121578.2-201ENST00000448797 447 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3AP84243 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3AP84243 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3AP84243 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 RPL5P12-201ENST00000477071 851 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 RN7SL655P-201ENST00000486087 298 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 RN7SL561P-201ENST00000488553 281 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 MTND6P8-201ENST00000503471 522 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 AC010442.1-201ENST00000515583 816 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3AP84243 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3AP84243 SNRPCP6-201ENST00000528310 210 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 AC007068.2-201ENST00000543168 395 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.03□□□□□ -1.44
H3F3AP84243 RN7SL270P-201ENST00000579643 281 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.03□□□□□ -1.44
H3F3AP84243 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
H3F3AP84243 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3F3AP84243 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.03□□□□□ -1.44
H3F3AP84243 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.03□□□□□ -1.44
H3F3AP84243 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms