Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.45□□□□□ -1.06
COL15A1P39059 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC8.45□□□□□ -1.06
COL15A1P39059 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC8.45□□□□□ -1.06
COL15A1P39059 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 DNAJA1P5-201ENST00000440278 943 ntBASIC8.45□□□□□ -1.06
COL15A1P39059 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC8.45□□□□□ -1.06
COL15A1P39059 AC133965.1-201ENST00000452984 354 ntBASIC8.45□□□□□ -1.06
COL15A1P39059 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.45□□□□□ -1.06
COL15A1P39059 H3F3AP3-201ENST00000497682 407 ntBASIC8.45□□□□□ -1.06
COL15A1P39059 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.45□□□□□ -1.06
COL15A1P39059 AC011352.2-201ENST00000514574 1016 ntBASIC8.45□□□□□ -1.06
COL15A1P39059 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.45□□□□□ -1.06
COL15A1P39059 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC8.45□□□□□ -1.06
COL15A1P39059 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC8.45□□□□□ -1.06
COL15A1P39059 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC8.45□□□□□ -1.06
COL15A1P39059 AC018692.2-201ENST00000624130 348 ntBASIC8.45□□□□□ -1.06
COL15A1P39059 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.45□□□□□ -1.06
COL15A1P39059 AC073488.9-201ENST00000631601 754 ntBASIC8.45□□□□□ -1.06
COL15A1P39059 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.45□□□□□ -1.06
COL15A1P39059 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.45□□□□□ -1.06
COL15A1P39059 MAPK10-383ENST00000642032 3390 ntBASIC8.45□□□□□ -1.06
COL15A1P39059 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.45□□□□□ -1.06
COL15A1P39059 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.44□□□□□ -1.06
COL15A1P39059 AC123912.3-201ENST00000600907 1367 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
COL15A1P39059 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
COL15A1P39059 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
COL15A1P39059 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
COL15A1P39059 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
COL15A1P39059 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
COL15A1P39059 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.44□□□□□ -1.06
COL15A1P39059 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.44□□□□□ -1.06
COL15A1P39059 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
COL15A1P39059 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
COL15A1P39059 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
COL15A1P39059 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
COL15A1P39059 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
COL15A1P39059 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
COL15A1P39059 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
COL15A1P39059 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.44□□□□□ -1.06
COL15A1P39059 GCNT1P4-201ENST00000404096 329 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 RNU6-233P-201ENST00000410845 141 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC8.44□□□□□ -1.06
COL15A1P39059 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
COL15A1P39059 RPL5P7-201ENST00000444235 813 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 HMGB3P14-201ENST00000494195 599 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 AC098799.1-201ENST00000504752 800 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
COL15A1P39059 UGT2A3P7-201ENST00000510485 734 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 ZNF519P4-201ENST00000514008 125 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 SCARNA5-201ENST00000516201 276 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 AC005632.2-201ENST00000564271 828 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC8.44□□□□□ -1.06
COL15A1P39059 AC002519.2-203ENST00000567043 837 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 AC106785.4-201ENST00000569492 412 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 RN7SL404P-201ENST00000582421 281 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC8.44□□□□□ -1.06
COL15A1P39059 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.44□□□□□ -1.06
COL15A1P39059 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 Six3os1_4.1-201ENST00000615706 324 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.44□□□□□ -1.06
COL15A1P39059 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
COL15A1P39059 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
COL15A1P39059 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
COL15A1P39059 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
COL15A1P39059 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.44□□□□□ -1.06
COL15A1P39059 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
COL15A1P39059 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.44□□□□□ -1.06
COL15A1P39059 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 BX322650.1-201ENST00000332359 2143 ntBASIC8.43□□□□□ -1.06
COL15A1P39059 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.43□□□□□ -1.06
COL15A1P39059 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
COL15A1P39059 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 COL6A4P1-202ENST00000487147 4317 ntBASIC8.43□□□□□ -1.06
COL15A1P39059 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.43□□□□□ -1.06
COL15A1P39059 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.43□□□□□ -1.06
COL15A1P39059 AC022613.3-201ENST00000560740 1346 ntBASIC8.43□□□□□ -1.06
COL15A1P39059 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.43□□□□□ -1.06
COL15A1P39059 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
COL15A1P39059 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.43□□□□□ -1.06
COL15A1P39059 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC8.43□□□□□ -1.06
COL15A1P39059 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
COL15A1P39059 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.43□□□□□ -1.06
COL15A1P39059 RN7SKP296-201ENST00000411185 341 ntBASIC8.43□□□□□ -1.06
COL15A1P39059 AL663061.1-201ENST00000416625 580 ntBASIC8.43□□□□□ -1.06
COL15A1P39059 AC092865.3-201ENST00000425390 1026 ntBASIC8.43□□□□□ -1.06
COL15A1P39059 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC8.43□□□□□ -1.06
COL15A1P39059 SULT1D1P-201ENST00000458020 882 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms