Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGA1P17096 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 AL049697.3-201ENST00000406493 982 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGA1P17096 AC008753.1-201ENST00000423096 284 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 AC099782.1-201ENST00000425889 474 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGA1P17096 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGA1P17096 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGA1P17096 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGA1P17096 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGA1P17096 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGA1P17096 CCNJP2-201ENST00000457810 1163 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 RPL23AP64-201ENST00000469465 435 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGA1P17096 RN7SL362P-201ENST00000494228 267 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 AC091874.2-201ENST00000505889 720 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 AC095057.1-201ENST00000507583 168 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGA1P17096 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.86□□□□□ -1.31
HMGA1P17096 RN7SL208P-201ENST00000577964 296 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 AL356986.1-201ENST00000604085 341 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 uc_338.31-201ENST00000615595 186 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 OR1N1-202ENST00000619659 939 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 AC073593.1-201ENST00000624500 411 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 CASC19-274ENST00000642018 970 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
HMGA1P17096 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGA1P17096 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 RPL31P11-201ENST00000426558 1558 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGA1P17096 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
HMGA1P17096 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 AC007993.1-201ENST00000621298 2430 ntBASIC6.86□□□□□ -1.31
HMGA1P17096 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGA1P17096 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGA1P17096 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGA1P17096 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGA1P17096 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGA1P17096 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.85□□□□□ -1.31
HMGA1P17096 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.85□□□□□ -1.31
HMGA1P17096 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.85□□□□□ -1.31
HMGA1P17096 AC007485.2-201ENST00000623493 1667 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 SMG1P5-202ENST00000529428 4219 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 SMG1P2-201ENST00000566127 4221 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HMGA1P17096 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.85□□□□□ -1.31
HMGA1P17096 RPL21P50-201ENST00000417698 477 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.85□□□□□ -1.31
HMGA1P17096 RPSAP40-201ENST00000442343 891 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 OR2L9P-201ENST00000444456 913 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.85□□□□□ -1.31
HMGA1P17096 AC093166.3-201ENST00000448785 303 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGA1P17096 RN7SL552P-201ENST00000462094 276 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.85□□□□□ -1.31
HMGA1P17096 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGA1P17096 AC122718.2-201ENST00000505325 591 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.85□□□□□ -1.31
HMGA1P17096 AC092375.1-201ENST00000550410 637 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 AC090888.3-201ENST00000558917 509 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 AL499605.1-201ENST00000604628 403 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGA1P17096 LINC02495-203ENST00000636704 242 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 BRAFP1-201ENST00000445336 2703 ntBASIC6.85□□□□□ -1.31
HMGA1P17096 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HMGA1P17096 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGA1P17096 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms