Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.1□□□□□ -1.59
CXCL1P09341 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CXCL1P09341 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 MIR133A2-201ENST00000347538 102 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 RNU1-38P-201ENST00000362817 144 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 SNORA38B-201ENST00000363524 131 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 RNA5SP472-201ENST00000363868 119 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 RN7SKP76-201ENST00000364419 323 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 RN7SKP47-201ENST00000365347 328 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 PPIAP30-201ENST00000415473 519 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 AL627308.2-201ENST00000420014 432 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC5.1□□□□□ -1.59
CXCL1P09341 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 CCNJP2-201ENST00000457810 1163 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 RPS4XP19-201ENST00000460237 736 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 RPSAP24-201ENST00000461543 873 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.1□□□□□ -1.59
CXCL1P09341 RPL23AP8-201ENST00000479812 475 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC5.1□□□□□ -1.59
CXCL1P09341 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL1P09341 AC114786.3-201ENST00000509304 705 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL1P09341 SCARNA6-201ENST00000515982 265 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL1P09341 GUCY1B2-204ENST00000531898 1979 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 OR4A40P-201ENST00000533878 948 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL1P09341 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CXCL1P09341 AL031846.1-201ENST00000560933 314 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 KYNUP3-201ENST00000574386 1341 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 RN7SL697P-201ENST00000582484 299 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 EIF1-207ENST00000591776 797 ntTSL 4 BASIC5.1□□□□□ -1.59
CXCL1P09341 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC5.1□□□□□ -1.59
CXCL1P09341 ELMO2P1-202ENST00000614283 794 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 AC068234.2-201ENST00000619646 522 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 AC002094.5-201ENST00000623773 629 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CXCL1P09341 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 AC004158.1-201ENST00000564508 4319 ntBASIC5.1□□□□□ -1.59
CXCL1P09341 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CXCL1P09341 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CXCL1P09341 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.09□□□□□ -1.59
CXCL1P09341 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL1P09341 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL1P09341 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL1P09341 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.09□□□□□ -1.59
CXCL1P09341 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC5.09□□□□□ -1.59
CXCL1P09341 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CXCL1P09341 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL1P09341 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL1P09341 EEF1A1P20-201ENST00000514852 1386 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 AC022164.1-201ENST00000568767 2673 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL1P09341 MIR152-201ENST00000385212 87 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 MSRB1P1-201ENST00000396851 354 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 AL121835.1-201ENST00000404250 354 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL1P09341 RN7SKP17-201ENST00000411242 351 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CXCL1P09341 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC5.09□□□□□ -1.59
CXCL1P09341 AC245452.2-201ENST00000435222 392 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 RPE-210ENST00000438204 796 ntTSL 2 BASIC5.09□□□□□ -1.59
CXCL1P09341 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CXCL1P09341 RPE-213ENST00000445268 668 ntTSL 5 BASIC5.09□□□□□ -1.59
CXCL1P09341 SETP4-201ENST00000455717 868 ntBASIC5.09□□□□□ -1.59
CXCL1P09341 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC5.09□□□□□ -1.59
CXCL1P09341 RN7SL382P-201ENST00000482631 282 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms