Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 USP46-207ENST00000508499 1419 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 PWRN1-212ENST00000569908 1435 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 RACGAP1-209ENST00000547905 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 ABCF2P1-201ENST00000465687 1867 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AP002001.2-201ENST00000529025 1469 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 RN7SKP72-201ENST00000362327 292 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 RN7SKP226-201ENST00000364912 300 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 MT-TD-201ENST00000387419 68 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 RNASE1-203ENST00000397970 769 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 NUS1P4-201ENST00000401550 585 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 RNA5SP221-201ENST00000411271 103 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 HNRNPA1P29-201ENST00000426409 879 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 RPE-207ENST00000435437 858 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 TRIM60P16-201ENST00000444048 694 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AL390026.1-201ENST00000456647 457 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 RPL5P24-201ENST00000463742 885 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 MTND1P16-201ENST00000465177 898 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 RPL7P24-201ENST00000493052 752 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 RPL10P9-201ENST00000522551 645 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AL352979.1-201ENST00000554238 297 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC006960.3-201ENST00000561845 705 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AL138976.2-201ENST00000563989 694 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC093249.5-201ENST00000568120 430 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 RN7SL203P-201ENST00000579600 296 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 RN7SL468P-201ENST00000582256 294 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC002059.1-201ENST00000608014 477 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 RN7SL796P-201ENST00000613991 291 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC110926.1-201ENST00000412499 2825 ntBASIC8.54□□□□□ -1.04
CFAP99D6REC4 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CFAP99D6REC4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.54□□□□□ -1.04
CFAP99D6REC4 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP99D6REC4 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.53□□□□□ -1.04
CFAP99D6REC4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP99D6REC4 AL079343.1-201ENST00000572358 1771 ntBASIC8.53□□□□□ -1.04
CFAP99D6REC4 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP99D6REC4 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC8.53□□□□□ -1.04
CFAP99D6REC4 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP99D6REC4 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CFAP99D6REC4 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP99D6REC4 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP99D6REC4 AL390195.2-201ENST00000564771 2023 ntBASIC8.53□□□□□ -1.04
CFAP99D6REC4 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP99D6REC4 SOX5-203ENST00000396007 1379 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CFAP99D6REC4 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms