Protein–RNA interactions for Protein: A0A1W2PPD8

KDM4F, Lysine demethylase 4F, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4FA0A1W2PPD8 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC016716.1-201ENST00000265882 708 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 SNORD113-6-201ENST00000363345 75 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 MTND4P3-201ENST00000417829 541 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AMYP1-201ENST00000440059 1023 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC044797.1-201ENST00000445744 679 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC023271.1-201ENST00000445936 1090 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 RPL7AP71-201ENST00000451120 739 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC026348.1-201ENST00000462549 1053 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 PPIAP19-201ENST00000486414 492 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 RN7SL366P-201ENST00000577957 292 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC090616.2-202ENST00000584248 222 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 GLYATL1P2-202ENST00000588046 902 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 OR4G1P-201ENST00000588632 938 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 SMIM12P1-201ENST00000603004 274 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC113143.2-201ENST00000603849 394 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 IPO7P2-201ENST00000451446 1750 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 AC090229.1-201ENST00000590983 1609 ntBASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 FBXL7-201ENST00000329673 3960 ntTSL 2 BASIC10.84□□□□□ -0.67
KDM4FA0A1W2PPD8 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 PRPF38B-201ENST00000370021 3728 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC027279.4-201ENST00000624371 2072 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AP003486.1-201ENST00000525716 3994 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 MTND5P23-201ENST00000430812 1655 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 SEMA4D-211ENST00000438547 4824 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 RNU4-92P-201ENST00000363783 136 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 SSX9-201ENST00000376909 591 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 RNU6-692P-201ENST00000384496 107 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 CHMP1B2P-201ENST00000399581 597 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 RPS7P2-201ENST00000435134 607 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 VN1R54P-201ENST00000435210 1049 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 RAB11AP1-201ENST00000442978 646 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 PTENP1-201ENST00000447117 1215 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 RN7SL492P-201ENST00000460700 295 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 RPL34P34-201ENST00000465389 354 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 FTH1P2-201ENST00000466086 412 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 DUXAP2-201ENST00000519198 589 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC037479.1-201ENST00000558361 625 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC002400.1-201ENST00000569310 726 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 AC009878.1-201ENST00000621819 340 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 SNORA43.5-201ENST00000631270 138 ntBASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 PPP3CB-AS1-203ENST00000442133 2888 ntTSL 3 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 SCIMP-203ENST00000574081 2383 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC10.83□□□□□ -0.68
KDM4FA0A1W2PPD8 SLC22A24-203ENST00000612278 2101 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
KDM4FA0A1W2PPD8 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KDM4FA0A1W2PPD8 RASGRP3-201ENST00000402538 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms