Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 Z86062.1-201ENST00000406773 777 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL139098.1-201ENST00000407291 389 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 GLS-205ENST00000409626 997 ntTSL 2 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC138393.2-201ENST00000414742 246 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC104651.1-201ENST00000427559 735 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC000111.3-201ENST00000433478 193 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL441963.1-201ENST00000435137 792 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 FDPSP8-201ENST00000438304 1089 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 RPL15P1-201ENST00000439981 600 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 PPP1R8P1-201ENST00000452549 1044 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 SETP11-201ENST00000473027 690 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 RN7SL418P-201ENST00000473031 287 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 RPL7P42-201ENST00000481005 679 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC117392.1-201ENST00000487061 596 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 GAPDHP22-201ENST00000491037 413 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC104417.1-201ENST00000523974 751 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC034102.1-201ENST00000552016 604 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC009997.1-201ENST00000557862 129 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL049840.5-201ENST00000602827 552 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL390208.1-201ENST00000605885 644 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC093458.1-201ENST00000608912 222 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL133520.1-201ENST00000610430 700 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 RN7SL820P-201ENST00000616437 299 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 MIR6505-201ENST00000617206 71 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC048341.3-201ENST00000619323 491 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 LRRC77P-213ENST00000637727 880 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL596275.2-207ENST00000641188 675 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC087359.1-201ENST00000508335 1740 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 HSPD1P9-201ENST00000420325 1636 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL162632.3-201ENST00000566976 1625 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 FO082842.1-201ENST00000423552 1370 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 ICE2P1-201ENST00000512800 1849 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 NR1I3-204ENST00000367982 1322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 SSXP3-201ENST00000442971 1300 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AC245505.2-201ENST00000553572 3055 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 FUNDC2P3-201ENST00000334716 533 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 AL672167.1-206ENST00000356293 943 ntBASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 APOM-202ENST00000375918 922 ntTSL 2 BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CUEDC1Q9NWM3 RFKP1-201ENST00000400940 428 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms