Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC5.52□□□□□ -1.53
LMO4P61968 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.52□□□□□ -1.53
LMO4P61968 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.52□□□□□ -1.53
LMO4P61968 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LMO4P61968 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.52□□□□□ -1.53
LMO4P61968 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LMO4P61968 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LMO4P61968 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LMO4P61968 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 RNA5SP512-201ENST00000364550 120 ntBASIC5.52□□□□□ -1.53
LMO4P61968 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.52□□□□□ -1.53
LMO4P61968 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.52□□□□□ -1.53
LMO4P61968 RN7SKP86-201ENST00000410454 332 ntBASIC5.52□□□□□ -1.53
LMO4P61968 RPS20P25-201ENST00000412447 352 ntBASIC5.52□□□□□ -1.53
LMO4P61968 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.52□□□□□ -1.53
LMO4P61968 AL929472.1-201ENST00000417484 429 ntBASIC5.52□□□□□ -1.53
LMO4P61968 PSMC1P2-201ENST00000423961 1204 ntBASIC5.52□□□□□ -1.53
LMO4P61968 AL121578.1-201ENST00000428051 892 ntBASIC5.52□□□□□ -1.53
LMO4P61968 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.52□□□□□ -1.53
LMO4P61968 CRYGGP-201ENST00000443337 145 ntBASIC5.52□□□□□ -1.53
LMO4P61968 AL020997.1-201ENST00000446554 349 ntBASIC5.52□□□□□ -1.53
LMO4P61968 RPS27P20-201ENST00000492051 246 ntBASIC5.52□□□□□ -1.53
LMO4P61968 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.52□□□□□ -1.53
LMO4P61968 AC117500.1-201ENST00000497352 755 ntBASIC5.52□□□□□ -1.53
LMO4P61968 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.52□□□□□ -1.53
LMO4P61968 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.52□□□□□ -1.53
LMO4P61968 AC011352.2-201ENST00000514574 1016 ntBASIC5.52□□□□□ -1.53
LMO4P61968 Vault.2-201ENST00000516519 98 ntBASIC5.52□□□□□ -1.53
LMO4P61968 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 RN7SL199P-201ENST00000578752 281 ntBASIC5.52□□□□□ -1.53
LMO4P61968 RN7SL656P-201ENST00000579044 281 ntBASIC5.52□□□□□ -1.53
LMO4P61968 RN7SL404P-201ENST00000582421 281 ntBASIC5.52□□□□□ -1.53
LMO4P61968 MIR4271-201ENST00000582451 67 ntBASIC5.52□□□□□ -1.53
LMO4P61968 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.52□□□□□ -1.53
LMO4P61968 AL589765.6-201ENST00000601909 549 ntBASIC5.52□□□□□ -1.53
LMO4P61968 AC093635.1-201ENST00000609028 555 ntBASIC5.52□□□□□ -1.53
LMO4P61968 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.52□□□□□ -1.53
LMO4P61968 AC016590.3-201ENST00000611171 753 ntBASIC5.52□□□□□ -1.53
LMO4P61968 MIR6806-201ENST00000622141 64 ntBASIC5.52□□□□□ -1.53
LMO4P61968 AC034229.6-201ENST00000623704 224 ntBASIC5.52□□□□□ -1.53
LMO4P61968 AP000577.1-201ENST00000624366 878 ntBASIC5.52□□□□□ -1.53
LMO4P61968 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC5.52□□□□□ -1.53
LMO4P61968 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
LMO4P61968 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LMO4P61968 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.52□□□□□ -1.53
LMO4P61968 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC5.52□□□□□ -1.53
LMO4P61968 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 AC015871.3-201ENST00000618835 2261 ntBASIC5.51□□□□□ -1.53
LMO4P61968 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 AC122713.2-201ENST00000624942 3335 ntBASIC5.51□□□□□ -1.53
LMO4P61968 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 LINC01613-201ENST00000561476 2780 ntBASIC5.51□□□□□ -1.53
LMO4P61968 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LMO4P61968 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 AL034417.4-202ENST00000642135 2236 ntBASIC5.51□□□□□ -1.53
LMO4P61968 XIST-206ENST00000434839 2865 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 CAP1P2-201ENST00000417455 1409 ntBASIC5.51□□□□□ -1.53
LMO4P61968 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 AP001157.1-201ENST00000550837 2339 ntBASIC5.51□□□□□ -1.53
LMO4P61968 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.51□□□□□ -1.53
LMO4P61968 RNA5SP65-201ENST00000363166 119 ntBASIC5.51□□□□□ -1.53
LMO4P61968 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LMO4P61968 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LMO4P61968 PSMA6P1-201ENST00000400275 741 ntBASIC5.51□□□□□ -1.53
LMO4P61968 PRELID1P1-201ENST00000403549 660 ntBASIC5.51□□□□□ -1.53
LMO4P61968 VN1R12P-201ENST00000403778 876 ntBASIC5.51□□□□□ -1.53
LMO4P61968 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AL360013.1-201ENST00000419031 858 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AL139158.1-201ENST00000424719 340 ntBASIC5.51□□□□□ -1.53
LMO4P61968 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.51□□□□□ -1.53
LMO4P61968 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.51□□□□□ -1.53
LMO4P61968 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.51□□□□□ -1.53
LMO4P61968 CDK7P1-201ENST00000434574 693 ntBASIC5.51□□□□□ -1.53
LMO4P61968 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.51□□□□□ -1.53
LMO4P61968 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMO4P61968 AC118758.1-202ENST00000454719 225 ntBASIC5.51□□□□□ -1.53
LMO4P61968 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms