Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 FAM197Y4-202ENST00000622692 608 ntBASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGA7Q9Y5G6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 KRT18P68-201ENST00000392293 1000 ntBASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 RN7SL471P-201ENST00000580476 299 ntBASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 AC092368.3-202ENST00000574180 1591 ntBASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGA7Q9Y5G6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 MIR4497-201ENST00000583208 89 ntBASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 TCF3P1-201ENST00000423021 1937 ntBASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA7Q9Y5G6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 AL020996.1-203ENST00000536896 2307 ntBASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 C1QBPP2-201ENST00000528754 825 ntBASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA7Q9Y5G6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 AC011484.1-201ENST00000377652 1995 ntBASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA7Q9Y5G6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGA7Q9Y5G6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA7Q9Y5G6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA7Q9Y5G6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA7Q9Y5G6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms