Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 HLA-G-202ENST00000376815 851 ntBASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 HLA-G-203ENST00000376818 1127 ntBASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB2Q9Y5E7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB2Q9Y5E7 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 AC092720.2-201ENST00000602388 1665 ntBASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 AL031963.3-201ENST00000606441 850 ntBASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 KRT8P20-201ENST00000423953 1409 ntBASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
PCDHB2Q9Y5E7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB2Q9Y5E7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB2Q9Y5E7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB2Q9Y5E7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDHB2Q9Y5E7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.77■■□□□ 1.07
PCDHB2Q9Y5E7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 AL135905.2-201ENST00000584934 1404 ntBASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 AL049637.2-201ENST00000641778 930 ntBASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB2Q9Y5E7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB2Q9Y5E7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB2Q9Y5E7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB2Q9Y5E7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB2Q9Y5E7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB2Q9Y5E7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB2Q9Y5E7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDHB2Q9Y5E7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms