Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 AC005082.1-201ENST00000413042 2259 ntBASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.23■□□□□ 0.19
RCL1Q9Y2P8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 AC005332.8-201ENST00000622750 2735 ntBASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 KRT16P2-201ENST00000414673 1423 ntBASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RCL1Q9Y2P8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 LINC01465-201ENST00000408887 1940 ntBASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RCL1Q9Y2P8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RCL1Q9Y2P8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 AL032819.2-201ENST00000624543 2162 ntBASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RCL1Q9Y2P8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms