Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.97■■□□□ 1.11
NOD1Q9Y239 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.97■■□□□ 1.11
NOD1Q9Y239 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.97■■□□□ 1.11
NOD1Q9Y239 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.97■■□□□ 1.11
NOD1Q9Y239 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.97■■□□□ 1.11
NOD1Q9Y239 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NOD1Q9Y239 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NOD1Q9Y239 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NOD1Q9Y239 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.97■■□□□ 1.11
NOD1Q9Y239 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.97■■□□□ 1.11
NOD1Q9Y239 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NOD1Q9Y239 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NOD1Q9Y239 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NOD1Q9Y239 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NOD1Q9Y239 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NOD1Q9Y239 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NOD1Q9Y239 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 AL031985.4-201ENST00000642138 673 ntBASIC21.96■■□□□ 1.11
NOD1Q9Y239 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NOD1Q9Y239 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NOD1Q9Y239 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NOD1Q9Y239 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
NOD1Q9Y239 CYP2D8P-201ENST00000433633 1490 ntBASIC21.96■■□□□ 1.11
NOD1Q9Y239 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.95■■□□□ 1.1
NOD1Q9Y239 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NOD1Q9Y239 AC133561.1-201ENST00000568600 2415 ntBASIC21.95■■□□□ 1.1
NOD1Q9Y239 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NOD1Q9Y239 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.95■■□□□ 1.1
NOD1Q9Y239 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.95■■□□□ 1.1
NOD1Q9Y239 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NOD1Q9Y239 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.95■■□□□ 1.1
NOD1Q9Y239 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.95■■□□□ 1.1
NOD1Q9Y239 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.95■■□□□ 1.1
NOD1Q9Y239 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.95■■□□□ 1.1
NOD1Q9Y239 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NOD1Q9Y239 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NOD1Q9Y239 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.95■■□□□ 1.1
NOD1Q9Y239 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.95■■□□□ 1.1
NOD1Q9Y239 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 AC010947.1-201ENST00000623454 693 ntBASIC21.94■■□□□ 1.1
NOD1Q9Y239 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NOD1Q9Y239 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NOD1Q9Y239 AL121603.2-201ENST00000557373 2117 ntBASIC21.94■■□□□ 1.1
NOD1Q9Y239 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NOD1Q9Y239 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NOD1Q9Y239 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.93■■□□□ 1.1
NOD1Q9Y239 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NOD1Q9Y239 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.93■■□□□ 1.1
NOD1Q9Y239 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.93■■□□□ 1.1
NOD1Q9Y239 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.93■■□□□ 1.1
NOD1Q9Y239 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NOD1Q9Y239 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NOD1Q9Y239 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.93■■□□□ 1.1
NOD1Q9Y239 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.93■■□□□ 1.1
NOD1Q9Y239 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.93■■□□□ 1.1
NOD1Q9Y239 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.93■■□□□ 1.1
NOD1Q9Y239 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.93■■□□□ 1.1
NOD1Q9Y239 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NOD1Q9Y239 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NOD1Q9Y239 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.92■■□□□ 1.1
NOD1Q9Y239 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NOD1Q9Y239 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NOD1Q9Y239 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.92■■□□□ 1.1
NOD1Q9Y239 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NOD1Q9Y239 TERF1P1-201ENST00000311003 1181 ntBASIC21.92■■□□□ 1.1
NOD1Q9Y239 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
NOD1Q9Y239 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.92■■□□□ 1.1
NOD1Q9Y239 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.92■■□□□ 1.1
NOD1Q9Y239 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.92■■□□□ 1.1
NOD1Q9Y239 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms