Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 ZNRF2P3-201ENST00000424200 374 ntBASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 AC019069.1-201ENST00000610008 1333 ntBASIC19.22■□□□□ 0.67
PCDHGB4Q9UN71 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB4Q9UN71 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGB4Q9UN71 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGB4Q9UN71 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB4Q9UN71 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms