Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 AC018553.1-201ENST00000616682 1458 ntBASIC21.05■□□□□ 0.96
CDH9Q9ULB4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH9Q9ULB4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 TFP1-202ENST00000475455 1573 ntBASIC21.04■□□□□ 0.96
CDH9Q9ULB4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH9Q9ULB4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 RPS2P4-201ENST00000476944 856 ntBASIC21.03■□□□□ 0.96
CDH9Q9ULB4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CDH9Q9ULB4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 MIR718-201ENST00000390190 70 ntBASIC21.02■□□□□ 0.96
CDH9Q9ULB4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 KRT16P5-201ENST00000455284 522 ntBASIC21.02■□□□□ 0.96
CDH9Q9ULB4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 AC004264.1-201ENST00000608354 794 ntBASIC21.02■□□□□ 0.96
CDH9Q9ULB4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.02■□□□□ 0.96
CDH9Q9ULB4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.02■□□□□ 0.95
CDH9Q9ULB4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDH9Q9ULB4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH9Q9ULB4 AC092667.1-201ENST00000434301 2586 ntBASIC21■□□□□ 0.95
CDH9Q9ULB4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH9Q9ULB4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDH9Q9ULB4 AP006587.1-201ENST00000534129 1502 ntBASIC21■□□□□ 0.95
CDH9Q9ULB4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH9Q9ULB4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH9Q9ULB4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH9Q9ULB4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH9Q9ULB4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21■□□□□ 0.95
CDH9Q9ULB4 RARRES2P10-201ENST00000564312 460 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms