Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX41Q9UJV9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 KRT8P36-201ENST00000489121 1440 ntBASIC22.85■■□□□ 1.25
DDX41Q9UJV9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 AL390719.1-204ENST00000412397 1219 ntBASIC22.85■■□□□ 1.25
DDX41Q9UJV9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX41Q9UJV9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 Z99916.2-201ENST00000604037 246 ntBASIC22.84■■□□□ 1.25
DDX41Q9UJV9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX41Q9UJV9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX41Q9UJV9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.83■■□□□ 1.24
DDX41Q9UJV9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.83■■□□□ 1.24
DDX41Q9UJV9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.83■■□□□ 1.24
DDX41Q9UJV9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.83■■□□□ 1.24
DDX41Q9UJV9 AC121338.2-201ENST00000622535 1744 ntBASIC22.82■■□□□ 1.24
DDX41Q9UJV9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
DDX41Q9UJV9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX41Q9UJV9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX41Q9UJV9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX41Q9UJV9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DDX41Q9UJV9 MIR718-201ENST00000390190 70 ntBASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms