Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 CROCCP3-202ENST00000420820 1947 ntBASIC18.82■□□□□ 0.6
RIMS3Q9UJD0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIMS3Q9UJD0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RIMS3Q9UJD0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
RIMS3Q9UJD0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 LINC02228-203ENST00000641970 1355 ntBASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RIMS3Q9UJD0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIMS3Q9UJD0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 DUX4L2-201ENST00000561772 1275 ntBASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 AC104187.1-201ENST00000607510 612 ntBASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 DUX4L6-201ENST00000626483 1275 ntBASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 DUX4L1-201ENST00000627662 1275 ntBASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 DUX4L8-201ENST00000629013 1275 ntBASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 DUX4L3-201ENST00000630187 1275 ntBASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 DUX4L7-201ENST00000630678 1275 ntBASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 DUX4L5-201ENST00000630834 1275 ntBASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.79■□□□□ 0.6
RIMS3Q9UJD0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 SLC7A5P2-201ENST00000553010 536 ntBASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.78■□□□□ 0.6
RIMS3Q9UJD0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIMS3Q9UJD0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIMS3Q9UJD0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIMS3Q9UJD0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIMS3Q9UJD0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RIMS3Q9UJD0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIMS3Q9UJD0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RIMS3Q9UJD0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RIMS3Q9UJD0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.77■□□□□ 0.6
RIMS3Q9UJD0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms