Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 AC243732.1-201ENST00000612648 864 ntBASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 KRT8P36-201ENST00000489121 1440 ntBASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 LTB4R2-202ENST00000528054 3092 ntBASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 AC019069.1-201ENST00000610008 1333 ntBASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF2Q9P2I0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 KRT19P1-201ENST00000405746 1186 ntBASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 KRT18P61-201ENST00000585825 1298 ntBASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF2Q9P2I0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 SLC7A5P1-201ENST00000568957 537 ntBASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 UBE2DNL-204ENST00000602536 740 ntBASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF2Q9P2I0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 AL691432.2-201ENST00000607222 2038 ntBASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF2Q9P2I0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 HCG11-201ENST00000411553 5696 ntBASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF2Q9P2I0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms