Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 AC233723.2-201ENST00000623798 2106 ntBASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
TFCP2L1Q9NZI6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 AP006587.1-201ENST00000534129 1502 ntBASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 AC131212.4-201ENST00000623606 975 ntBASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
TFCP2L1Q9NZI6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
TFCP2L1Q9NZI6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.33■■□□□ 1.64
TFCP2L1Q9NZI6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 HCG4P8-203ENST00000443049 980 ntBASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 PTBP1P-201ENST00000554374 1601 ntBASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
TFCP2L1Q9NZI6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 AC130371.2-201ENST00000619443 611 ntBASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 AC011558.1-201ENST00000623459 338 ntBASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
TFCP2L1Q9NZI6 KRT8P20-201ENST00000423953 1409 ntBASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 CLEC4GP1-201ENST00000596555 870 ntBASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 AP000692.2-201ENST00000608391 879 ntBASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TFCP2L1Q9NZI6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 CCR12P-201ENST00000446203 998 ntBASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.29■■□□□ 1.64
TFCP2L1Q9NZI6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TFCP2L1Q9NZI6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms