Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 AC073210.2-201ENST00000430369 194 ntBASIC19.86■□□□□ 0.77
TREX1Q9NSU2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TREX1Q9NSU2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 SLC29A4P1-201ENST00000398760 971 ntBASIC19.85■□□□□ 0.77
TREX1Q9NSU2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 MYC-209ENST00000641252 345 ntBASIC19.85■□□□□ 0.77
TREX1Q9NSU2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TREX1Q9NSU2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.84■□□□□ 0.77
TREX1Q9NSU2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 AC005829.2-201ENST00000571422 1056 ntBASIC19.84■□□□□ 0.77
TREX1Q9NSU2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.84■□□□□ 0.77
TREX1Q9NSU2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.83■□□□□ 0.77
TREX1Q9NSU2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.83■□□□□ 0.77
TREX1Q9NSU2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.83■□□□□ 0.77
TREX1Q9NSU2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.83■□□□□ 0.76
TREX1Q9NSU2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.83■□□□□ 0.76
TREX1Q9NSU2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.83■□□□□ 0.76
TREX1Q9NSU2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TREX1Q9NSU2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TREX1Q9NSU2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 AC007952.6-201ENST00000573168 2673 ntBASIC19.82■□□□□ 0.76
TREX1Q9NSU2 AC003957.1-201ENST00000625108 2673 ntBASIC19.82■□□□□ 0.76
TREX1Q9NSU2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 MIR4758-201ENST00000577688 71 ntBASIC19.82■□□□□ 0.76
TREX1Q9NSU2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TREX1Q9NSU2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms