Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 KRT18P11-201ENST00000435214 1283 ntBASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 KRT18P61-201ENST00000585825 1298 ntBASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 KRT16P6-202ENST00000425692 1426 ntBASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOMER3Q9NSC5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 PTBP1P-201ENST00000554374 1601 ntBASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOMER3Q9NSC5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 LETM1P2-201ENST00000597330 2178 ntBASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOMER3Q9NSC5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 MCRIP2P1-201ENST00000394346 511 ntBASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 AC026471.1-201ENST00000564629 3026 ntBASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOMER3Q9NSC5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOMER3Q9NSC5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOMER3Q9NSC5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOMER3Q9NSC5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOMER3Q9NSC5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOMER3Q9NSC5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.64■□□□□ 0.9
HOMER3Q9NSC5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.64■□□□□ 0.9
HOMER3Q9NSC5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOMER3Q9NSC5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 AC093484.2-201ENST00000580996 2166 ntBASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 NTF6G-201ENST00000591094 616 ntBASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 AL031963.3-201ENST00000606441 850 ntBASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms