Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.54■□□□□ 0.72
PFDN4Q9NQP4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PFDN4Q9NQP4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PFDN4Q9NQP4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.52■□□□□ 0.71
PFDN4Q9NQP4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PFDN4Q9NQP4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.52■□□□□ 0.71
PFDN4Q9NQP4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.52■□□□□ 0.71
PFDN4Q9NQP4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 KRT18P61-201ENST00000585825 1298 ntBASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 UBE2DNL-204ENST00000602536 740 ntBASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.51■□□□□ 0.71
PFDN4Q9NQP4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.5■□□□□ 0.71
PFDN4Q9NQP4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms