Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 AL451085.2-201ENST00000605085 799 ntBASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 AP006587.3-201ENST00000525742 1516 ntBASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.57■□□□□ 0.56
VCX3AQ9NNX9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 AC139713.2-201ENST00000641328 2723 ntBASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VCX3AQ9NNX9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
VCX3AQ9NNX9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 AC011484.1-201ENST00000377652 1995 ntBASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3AQ9NNX9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.53■□□□□ 0.56
VCX3AQ9NNX9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3AQ9NNX9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.53■□□□□ 0.56
VCX3AQ9NNX9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VCX3AQ9NNX9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3AQ9NNX9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.53■□□□□ 0.56
VCX3AQ9NNX9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3AQ9NNX9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms