Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 AL355472.2-201ENST00000422958 438 ntBASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 AC007322.1-201ENST00000426983 750 ntBASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LRTM1Q9HBL6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRTM1Q9HBL6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRTM1Q9HBL6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRTM1Q9HBL6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRTM1Q9HBL6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.08■□□□□ 0.65
LRTM1Q9HBL6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 HLA-G-202ENST00000376815 851 ntBASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 HLA-G-203ENST00000376818 1127 ntBASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 AL589743.5-201ENST00000616611 1050 ntBASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 OR10C1-204ENST00000622521 1039 ntBASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.08■□□□□ 0.64
LRTM1Q9HBL6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms