Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
BRD9Q9H8M2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD9Q9H8M2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD9Q9H8M2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRD9Q9H8M2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRD9Q9H8M2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD9Q9H8M2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.58■□□□□ 0.89
BRD9Q9H8M2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.58■□□□□ 0.89
BRD9Q9H8M2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.58■□□□□ 0.89
BRD9Q9H8M2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD9Q9H8M2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD9Q9H8M2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD9Q9H8M2 KRT8P9-201ENST00000558927 1449 ntBASIC20.58■□□□□ 0.88
BRD9Q9H8M2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
BRD9Q9H8M2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
BRD9Q9H8M2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.58■□□□□ 0.88
BRD9Q9H8M2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD9Q9H8M2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 PLK5-205ENST00000642079 1969 ntBASIC20.57■□□□□ 0.88
BRD9Q9H8M2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 CR392000.1-201ENST00000624770 1228 ntBASIC20.57■□□□□ 0.88
BRD9Q9H8M2 AL590326.2-201ENST00000625139 305 ntBASIC20.57■□□□□ 0.88
BRD9Q9H8M2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 LINC01568-207ENST00000641790 1380 ntBASIC20.57■□□□□ 0.88
BRD9Q9H8M2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD9Q9H8M2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 KSR1P1-201ENST00000446298 240 ntBASIC20.56■□□□□ 0.88
BRD9Q9H8M2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 CLDN5-201ENST00000403084 2357 ntBASIC20.56■□□□□ 0.88
BRD9Q9H8M2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRD9Q9H8M2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 AC005521.1-201ENST00000393351 872 ntBASIC20.55■□□□□ 0.88
BRD9Q9H8M2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 NAPSB-206ENST00000562112 1266 ntBASIC20.55■□□□□ 0.88
BRD9Q9H8M2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
BRD9Q9H8M2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms