Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.83■■□□□ 1.08
VPS16Q9H269 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS16Q9H269 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS16Q9H269 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
VPS16Q9H269 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS16Q9H269 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
VPS16Q9H269 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VPS16Q9H269 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS16Q9H269 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
VPS16Q9H269 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS16Q9H269 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS16Q9H269 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS16Q9H269 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS16Q9H269 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS16Q9H269 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS16Q9H269 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS16Q9H269 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS16Q9H269 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.81■■□□□ 1.08
VPS16Q9H269 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.81■■□□□ 1.08
VPS16Q9H269 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
VPS16Q9H269 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VPS16Q9H269 AC016769.1-201ENST00000409132 1010 ntBASIC21.81■■□□□ 1.08
VPS16Q9H269 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VPS16Q9H269 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.81■■□□□ 1.08
VPS16Q9H269 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.81■■□□□ 1.08
VPS16Q9H269 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
VPS16Q9H269 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VPS16Q9H269 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 AC100791.3-201ENST00000617619 330 ntBASIC21.81■■□□□ 1.08
VPS16Q9H269 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
VPS16Q9H269 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.81■■□□□ 1.08
VPS16Q9H269 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
VPS16Q9H269 AC009237.14-201ENST00000609975 1594 ntBASIC21.81■■□□□ 1.08
VPS16Q9H269 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
VPS16Q9H269 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS16Q9H269 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS16Q9H269 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS16Q9H269 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS16Q9H269 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
VPS16Q9H269 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS16Q9H269 AP000974.1-201ENST00000623909 2387 ntBASIC21.8■■□□□ 1.08
VPS16Q9H269 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS16Q9H269 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS16Q9H269 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.8■■□□□ 1.08
VPS16Q9H269 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.8■■□□□ 1.08
VPS16Q9H269 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.8■■□□□ 1.08
VPS16Q9H269 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS16Q9H269 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS16Q9H269 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VPS16Q9H269 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS16Q9H269 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
VPS16Q9H269 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS16Q9H269 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS16Q9H269 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS16Q9H269 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
VPS16Q9H269 KRT18P68-201ENST00000392293 1000 ntBASIC21.79■■□□□ 1.08
VPS16Q9H269 AL355472.2-201ENST00000422958 438 ntBASIC21.79■■□□□ 1.08
VPS16Q9H269 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
VPS16Q9H269 AL031963.3-201ENST00000606441 850 ntBASIC21.79■■□□□ 1.08
VPS16Q9H269 AC105020.6-201ENST00000621523 1217 ntBASIC21.79■■□□□ 1.08
VPS16Q9H269 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS16Q9H269 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
VPS16Q9H269 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS16Q9H269 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.79■■□□□ 1.08
VPS16Q9H269 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VPS16Q9H269 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
VPS16Q9H269 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS16Q9H269 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS16Q9H269 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
VPS16Q9H269 AL020996.1-203ENST00000536896 2307 ntBASIC21.78■■□□□ 1.08
VPS16Q9H269 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS16Q9H269 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS16Q9H269 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VPS16Q9H269 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS16Q9H269 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS16Q9H269 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS16Q9H269 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.78■■□□□ 1.08
VPS16Q9H269 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.78■■□□□ 1.08
VPS16Q9H269 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
VPS16Q9H269 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VPS16Q9H269 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS16Q9H269 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS16Q9H269 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.77■■□□□ 1.08
VPS16Q9H269 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS16Q9H269 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.77■■□□□ 1.08
VPS16Q9H269 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.77■■□□□ 1.08
VPS16Q9H269 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms