Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 AL355802.2-201ENST00000402069 882 ntBASIC18.28■□□□□ 0.52
TRIM2Q9C040 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM2Q9C040 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM2Q9C040 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM2Q9C040 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM2Q9C040 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM2Q9C040 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM2Q9C040 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM2Q9C040 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM2Q9C040 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM2Q9C040 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM2Q9C040 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 HLA-G-202ENST00000376815 851 ntBASIC18.27■□□□□ 0.52
TRIM2Q9C040 HLA-G-203ENST00000376818 1127 ntBASIC18.27■□□□□ 0.52
TRIM2Q9C040 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 AL121832.2-201ENST00000610979 668 ntBASIC18.27■□□□□ 0.52
TRIM2Q9C040 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM2Q9C040 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM2Q9C040 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM2Q9C040 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM2Q9C040 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TRIM2Q9C040 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM2Q9C040 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRIM2Q9C040 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM2Q9C040 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM2Q9C040 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM2Q9C040 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM2Q9C040 AC083906.2-201ENST00000511578 360 ntBASIC18.26■□□□□ 0.51
TRIM2Q9C040 C2orf69P4-201ENST00000565394 541 ntBASIC18.26■□□□□ 0.51
TRIM2Q9C040 AC133552.2-202ENST00000575694 574 ntBASIC18.26■□□□□ 0.51
TRIM2Q9C040 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM2Q9C040 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM2Q9C040 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM2Q9C040 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM2Q9C040 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM2Q9C040 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM2Q9C040 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM2Q9C040 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM2Q9C040 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM2Q9C040 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM2Q9C040 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM2Q9C040 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM2Q9C040 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM2Q9C040 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM2Q9C040 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM2Q9C040 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM2Q9C040 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRIM2Q9C040 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM2Q9C040 AC093787.1-201ENST00000450396 207 ntBASIC18.24■□□□□ 0.51
TRIM2Q9C040 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM2Q9C040 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms