Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 GXYLT1P2-201ENST00000433312 1230 ntBASIC11.81□□□□□ -0.52
LIMD2Q9BT23 PBX1-209ENST00000485769 834 ntTSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 PLD4-205ENST00000553861 667 ntTSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 AC137761.2-201ENST00000561729 223 ntBASIC11.81□□□□□ -0.52
LIMD2Q9BT23 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 AC145350.3-201ENST00000569033 163 ntBASIC11.81□□□□□ -0.52
LIMD2Q9BT23 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 UBE2DNL-204ENST00000602536 740 ntBASIC11.81□□□□□ -0.52
LIMD2Q9BT23 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 AC019069.1-201ENST00000610008 1333 ntBASIC11.81□□□□□ -0.52
LIMD2Q9BT23 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LIMD2Q9BT23 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 AC018445.3-201ENST00000624177 1945 ntBASIC11.8□□□□□ -0.52
LIMD2Q9BT23 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 SAPCD2P1-201ENST00000395413 1184 ntBASIC11.8□□□□□ -0.52
LIMD2Q9BT23 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 HTR7P1-202ENST00000624664 4411 ntBASIC11.8□□□□□ -0.52
LIMD2Q9BT23 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 GABARAPL3-202ENST00000624044 1851 ntBASIC11.8□□□□□ -0.52
LIMD2Q9BT23 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LIMD2Q9BT23 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 AC027702.1-201ENST00000563810 1770 ntBASIC11.79□□□□□ -0.52
LIMD2Q9BT23 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 FER1L4-210ENST00000615531 5998 ntBASIC11.79□□□□□ -0.52
LIMD2Q9BT23 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 AC092720.2-201ENST00000602388 1665 ntBASIC11.79□□□□□ -0.52
LIMD2Q9BT23 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LIMD2Q9BT23 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms