Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.62■□□□□ 0.89
HERPUD2Q9BSE4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.62■□□□□ 0.89
HERPUD2Q9BSE4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HERPUD2Q9BSE4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.62■□□□□ 0.89
HERPUD2Q9BSE4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HERPUD2Q9BSE4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 KRT8P20-201ENST00000423953 1409 ntBASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 OR10C1-204ENST00000622521 1039 ntBASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HERPUD2Q9BSE4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 CROCCP5-201ENST00000436658 830 ntBASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 C2orf69P4-201ENST00000565394 541 ntBASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 AC005181.1-201ENST00000604782 1256 ntBASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HERPUD2Q9BSE4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 MIR663A-201ENST00000385250 93 ntBASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HERPUD2Q9BSE4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 AC008694.1-202ENST00000636953 945 ntBASIC20.58■□□□□ 0.89
HERPUD2Q9BSE4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.58■□□□□ 0.88
HERPUD2Q9BSE4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HERPUD2Q9BSE4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HERPUD2Q9BSE4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.58■□□□□ 0.88
HERPUD2Q9BSE4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
HERPUD2Q9BSE4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.58■□□□□ 0.88
HERPUD2Q9BSE4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms