Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 NTF6G-201ENST00000591094 616 ntBASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 AC105020.6-201ENST00000621523 1217 ntBASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CPPED1Q9BRF8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 AC100791.3-201ENST00000617619 330 ntBASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.68■□□□□ 0.58
CPPED1Q9BRF8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 RARRES2P4-201ENST00000514074 484 ntBASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPPED1Q9BRF8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 AL032819.2-201ENST00000624543 2162 ntBASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CPPED1Q9BRF8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 MFSD11-216ENST00000590393 1141 ntBASIC18.65■□□□□ 0.58
CPPED1Q9BRF8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms