Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.37■□□□□ 0.69
EBF4Q9BQW3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EBF4Q9BQW3 AC007613.1-201ENST00000572811 2597 ntBASIC19.37■□□□□ 0.69
EBF4Q9BQW3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 AC026471.1-201ENST00000564629 3026 ntBASIC19.36■□□□□ 0.69
EBF4Q9BQW3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 LINC01465-201ENST00000408887 1940 ntBASIC19.36■□□□□ 0.69
EBF4Q9BQW3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EBF4Q9BQW3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 AC131212.1-201ENST00000613771 668 ntBASIC19.35■□□□□ 0.69
EBF4Q9BQW3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EBF4Q9BQW3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 AL356652.1-201ENST00000615962 565 ntBASIC19.34■□□□□ 0.69
EBF4Q9BQW3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EBF4Q9BQW3 PTBP1P-201ENST00000554374 1601 ntBASIC19.33■□□□□ 0.69
EBF4Q9BQW3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
EBF4Q9BQW3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms