Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ABCA3Q99758 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.7■■□□□ 1.87
ABCA3Q99758 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC26.7■■□□□ 1.86
ABCA3Q99758 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
ABCA3Q99758 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.7■■□□□ 1.86
ABCA3Q99758 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC26.7■■□□□ 1.86
ABCA3Q99758 AC092647.4-201ENST00000457211 535 ntBASIC26.7■■□□□ 1.86
ABCA3Q99758 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ABCA3Q99758 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC26.7■■□□□ 1.86
ABCA3Q99758 CD81-212ENST00000526072 1172 ntTSL 5 BASIC26.7■■□□□ 1.86
ABCA3Q99758 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.7■■□□□ 1.86
ABCA3Q99758 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA3Q99758 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.69■■□□□ 1.86
ABCA3Q99758 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA3Q99758 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA3Q99758 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC26.69■■□□□ 1.86
ABCA3Q99758 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
ABCA3Q99758 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA3Q99758 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA3Q99758 BX664615.1-201ENST00000443558 458 ntBASIC26.69■■□□□ 1.86
ABCA3Q99758 AC141257.4-201ENST00000634557 245 ntBASIC26.69■■□□□ 1.86
ABCA3Q99758 AC136944.6-201ENST00000634818 245 ntBASIC26.69■■□□□ 1.86
ABCA3Q99758 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA3Q99758 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
ABCA3Q99758 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA3Q99758 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
ABCA3Q99758 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
ABCA3Q99758 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA3Q99758 AC116351.2-201ENST00000606540 1585 ntBASIC26.69■■□□□ 1.86
ABCA3Q99758 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC26.69■■□□□ 1.86
ABCA3Q99758 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ABCA3Q99758 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ABCA3Q99758 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC26.68■■□□□ 1.86
ABCA3Q99758 GXYLT1P6-201ENST00000456472 1187 ntBASIC26.68■■□□□ 1.86
ABCA3Q99758 COX11P1-201ENST00000489116 835 ntBASIC26.68■■□□□ 1.86
ABCA3Q99758 AC011298.2-201ENST00000617989 482 ntBASIC26.68■■□□□ 1.86
ABCA3Q99758 AC010653.2-201ENST00000623505 997 ntBASIC26.68■■□□□ 1.86
ABCA3Q99758 CLN6-214ENST00000636314 442 ntTSL 3 BASIC26.68■■□□□ 1.86
ABCA3Q99758 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
ABCA3Q99758 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ABCA3Q99758 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ABCA3Q99758 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ABCA3Q99758 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
ABCA3Q99758 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
ABCA3Q99758 IPPK-202ENST00000375522 882 ntTSL 3 BASIC26.68■■□□□ 1.86
ABCA3Q99758 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC26.68■■□□□ 1.86
ABCA3Q99758 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC26.68■■□□□ 1.86
ABCA3Q99758 CYGB-204ENST00000589342 815 ntTSL 3 BASIC26.68■■□□□ 1.86
ABCA3Q99758 CLEC4GP1-201ENST00000596555 870 ntBASIC26.68■■□□□ 1.86
ABCA3Q99758 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC26.68■■□□□ 1.86
ABCA3Q99758 AC012313.10-201ENST00000623509 926 ntBASIC26.68■■□□□ 1.86
ABCA3Q99758 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC26.67■■□□□ 1.86
ABCA3Q99758 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC26.67■■□□□ 1.86
ABCA3Q99758 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
ABCA3Q99758 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
ABCA3Q99758 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.67■■□□□ 1.86
ABCA3Q99758 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.67■■□□□ 1.86
ABCA3Q99758 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.67■■□□□ 1.86
ABCA3Q99758 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA3Q99758 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA3Q99758 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA3Q99758 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA3Q99758 PTPA-216ENST00000432651 857 ntTSL 2 BASIC26.67■■□□□ 1.86
ABCA3Q99758 AL671277.2-201ENST00000458060 996 ntBASIC26.67■■□□□ 1.86
ABCA3Q99758 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC26.67■■□□□ 1.86
ABCA3Q99758 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ABCA3Q99758 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA3Q99758 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA3Q99758 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA3Q99758 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA3Q99758 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC26.66■■□□□ 1.86
ABCA3Q99758 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.66■■□□□ 1.86
ABCA3Q99758 AP000692.2-201ENST00000608391 879 ntBASIC26.66■■□□□ 1.86
ABCA3Q99758 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC26.66■■□□□ 1.86
ABCA3Q99758 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA3Q99758 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ABCA3Q99758 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC26.66■■□□□ 1.86
ABCA3Q99758 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
ABCA3Q99758 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
ABCA3Q99758 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 CCR12P-201ENST00000446203 998 ntBASIC26.65■■□□□ 1.86
ABCA3Q99758 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC26.65■■□□□ 1.86
ABCA3Q99758 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.65■■□□□ 1.86
ABCA3Q99758 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 AC131212.4-201ENST00000623606 975 ntBASIC26.65■■□□□ 1.86
ABCA3Q99758 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
ABCA3Q99758 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ABCA3Q99758 TSPY5P-201ENST00000426936 936 ntBASIC26.65■■□□□ 1.86
ABCA3Q99758 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC26.65■■□□□ 1.86
ABCA3Q99758 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC26.65■■□□□ 1.86
ABCA3Q99758 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC26.65■■□□□ 1.86
ABCA3Q99758 HLA-A-209ENST00000638375 975 ntBASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms