Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 HLA-G-203ENST00000376818 1127 ntBASIC20.63■□□□□ 0.89
NOTCH4Q99466 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.63■□□□□ 0.89
NOTCH4Q99466 AC018553.1-201ENST00000616682 1458 ntBASIC20.63■□□□□ 0.89
NOTCH4Q99466 DPP3P2-201ENST00000416030 1696 ntBASIC20.63■□□□□ 0.89
NOTCH4Q99466 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NOTCH4Q99466 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NOTCH4Q99466 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 TFP1-202ENST00000475455 1573 ntBASIC20.63■□□□□ 0.89
NOTCH4Q99466 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.63■□□□□ 0.89
NOTCH4Q99466 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NOTCH4Q99466 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NOTCH4Q99466 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NOTCH4Q99466 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NOTCH4Q99466 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NOTCH4Q99466 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NOTCH4Q99466 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NOTCH4Q99466 AL445675.2-201ENST00000620291 557 ntBASIC20.62■□□□□ 0.89
NOTCH4Q99466 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NOTCH4Q99466 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NOTCH4Q99466 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.62■□□□□ 0.89
NOTCH4Q99466 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH4Q99466 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
NOTCH4Q99466 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NOTCH4Q99466 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
NOTCH4Q99466 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.61■□□□□ 0.89
NOTCH4Q99466 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH4Q99466 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH4Q99466 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.61■□□□□ 0.89
NOTCH4Q99466 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH4Q99466 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NOTCH4Q99466 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.61■□□□□ 0.89
NOTCH4Q99466 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH4Q99466 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH4Q99466 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NOTCH4Q99466 KRT18P22-201ENST00000402024 1347 ntBASIC20.61■□□□□ 0.89
NOTCH4Q99466 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NOTCH4Q99466 AC007225.1-201ENST00000566331 1836 ntBASIC20.6■□□□□ 0.89
NOTCH4Q99466 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NOTCH4Q99466 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.6■□□□□ 0.89
NOTCH4Q99466 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NOTCH4Q99466 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NOTCH4Q99466 B3GAT3P1-201ENST00000471720 806 ntBASIC20.6■□□□□ 0.89
NOTCH4Q99466 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NOTCH4Q99466 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.6■□□□□ 0.89
NOTCH4Q99466 AC116351.2-201ENST00000606540 1585 ntBASIC20.6■□□□□ 0.89
NOTCH4Q99466 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NOTCH4Q99466 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.6■□□□□ 0.89
NOTCH4Q99466 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.6■□□□□ 0.89
NOTCH4Q99466 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NOTCH4Q99466 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.59■□□□□ 0.89
NOTCH4Q99466 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NOTCH4Q99466 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NOTCH4Q99466 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NOTCH4Q99466 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NOTCH4Q99466 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NOTCH4Q99466 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NOTCH4Q99466 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.59■□□□□ 0.89
NOTCH4Q99466 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NOTCH4Q99466 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NOTCH4Q99466 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NOTCH4Q99466 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.58■□□□□ 0.89
NOTCH4Q99466 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NOTCH4Q99466 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.58■□□□□ 0.89
NOTCH4Q99466 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.58■□□□□ 0.89
NOTCH4Q99466 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.58■□□□□ 0.89
NOTCH4Q99466 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
NOTCH4Q99466 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.58■□□□□ 0.89
NOTCH4Q99466 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NOTCH4Q99466 AP006587.1-201ENST00000534129 1502 ntBASIC20.58■□□□□ 0.88
NOTCH4Q99466 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NOTCH4Q99466 NAPSB-206ENST00000562112 1266 ntBASIC20.58■□□□□ 0.88
NOTCH4Q99466 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NOTCH4Q99466 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NOTCH4Q99466 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.57■□□□□ 0.88
NOTCH4Q99466 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.57■□□□□ 0.88
NOTCH4Q99466 FSCN1P1-201ENST00000568912 1481 ntBASIC20.57■□□□□ 0.88
NOTCH4Q99466 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NOTCH4Q99466 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NOTCH4Q99466 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NOTCH4Q99466 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NOTCH4Q99466 DGCR10-201ENST00000609839 495 ntBASIC20.57■□□□□ 0.88
NOTCH4Q99466 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NOTCH4Q99466 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NOTCH4Q99466 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NOTCH4Q99466 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NOTCH4Q99466 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms