Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 LINC01465-201ENST00000408887 1940 ntBASIC16.1■□□□□ 0.17
RAB40CQ96S21 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 MIR939-201ENST00000401314 82 ntBASIC16.1■□□□□ 0.17
RAB40CQ96S21 AC091305.1-201ENST00000479476 895 ntBASIC16.1■□□□□ 0.17
RAB40CQ96S21 AL031432.3-201ENST00000607698 485 ntBASIC16.1■□□□□ 0.17
RAB40CQ96S21 AC005837.3-201ENST00000612163 286 ntBASIC16.1■□□□□ 0.17
RAB40CQ96S21 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 AL358852.1-201ENST00000623174 1268 ntBASIC16.1■□□□□ 0.17
RAB40CQ96S21 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAB40CQ96S21 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAB40CQ96S21 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB40CQ96S21 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB40CQ96S21 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB40CQ96S21 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.09■□□□□ 0.17
RAB40CQ96S21 SUDS3P1-201ENST00000505831 966 ntBASIC16.09■□□□□ 0.17
RAB40CQ96S21 AC079140.4-201ENST00000507448 529 ntBASIC16.09■□□□□ 0.17
RAB40CQ96S21 AC012414.1-201ENST00000556676 535 ntBASIC16.09■□□□□ 0.17
RAB40CQ96S21 AC142381.2-201ENST00000566120 298 ntBASIC16.09■□□□□ 0.17
RAB40CQ96S21 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB40CQ96S21 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAB40CQ96S21 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAB40CQ96S21 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB40CQ96S21 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40CQ96S21 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40CQ96S21 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40CQ96S21 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40CQ96S21 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RAB40CQ96S21 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40CQ96S21 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40CQ96S21 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB40CQ96S21 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40CQ96S21 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40CQ96S21 AC007322.3-201ENST00000426526 701 ntBASIC16.08■□□□□ 0.16
RAB40CQ96S21 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40CQ96S21 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40CQ96S21 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB40CQ96S21 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB40CQ96S21 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB40CQ96S21 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB40CQ96S21 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 TPRG1LP1-201ENST00000598702 760 ntBASIC16.07■□□□□ 0.16
RAB40CQ96S21 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40CQ96S21 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 AL032819.2-201ENST00000624543 2162 ntBASIC16.07■□□□□ 0.16
RAB40CQ96S21 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB40CQ96S21 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms