Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 ZNRF2P3-201ENST00000424200 374 ntBASIC16.97■□□□□ 0.31
CITED4Q96RK1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CITED4Q96RK1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CITED4Q96RK1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 C17orf82-201ENST00000623772 1530 ntBASIC16.96■□□□□ 0.31
CITED4Q96RK1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.96■□□□□ 0.31
CITED4Q96RK1 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.96■□□□□ 0.31
CITED4Q96RK1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CITED4Q96RK1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CITED4Q96RK1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.96■□□□□ 0.31
CITED4Q96RK1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CITED4Q96RK1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CITED4Q96RK1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CITED4Q96RK1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.96■□□□□ 0.3
CITED4Q96RK1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CITED4Q96RK1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CITED4Q96RK1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CITED4Q96RK1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CITED4Q96RK1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CITED4Q96RK1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CITED4Q96RK1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 TCF3P1-201ENST00000423021 1937 ntBASIC16.95■□□□□ 0.3
CITED4Q96RK1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CITED4Q96RK1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CITED4Q96RK1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms