Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CSMD1Q96PZ7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CSMD1Q96PZ7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD1Q96PZ7 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.02■□□□□ 0.31
CSMD1Q96PZ7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.02■□□□□ 0.31
CSMD1Q96PZ7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSMD1Q96PZ7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CSMD1Q96PZ7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 AL031985.4-201ENST00000642138 673 ntBASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSMD1Q96PZ7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSMD1Q96PZ7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSMD1Q96PZ7 DGCR10-201ENST00000609839 495 ntBASIC17■□□□□ 0.31
CSMD1Q96PZ7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17■□□□□ 0.31
CSMD1Q96PZ7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSMD1Q96PZ7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSMD1Q96PZ7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSMD1Q96PZ7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17■□□□□ 0.31
CSMD1Q96PZ7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 AC009078.2-202ENST00000463353 338 ntBASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 AP002982.1-201ENST00000492365 877 ntBASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.99■□□□□ 0.31
CSMD1Q96PZ7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 EGLN1P1-201ENST00000531623 762 ntBASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.98■□□□□ 0.31
CSMD1Q96PZ7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.97■□□□□ 0.31
CSMD1Q96PZ7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms