Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC3BQ96PB8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC3BQ96PB8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LRRC3BQ96PB8 LINC01568-207ENST00000641790 1380 ntBASIC20.44■□□□□ 0.86
LRRC3BQ96PB8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRC3BQ96PB8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LRRC3BQ96PB8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC3BQ96PB8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC3BQ96PB8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 KRT18P35-201ENST00000510488 1269 ntBASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 C1QL1P1-201ENST00000568105 661 ntBASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 AC005363.2-201ENST00000618631 242 ntBASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC3BQ96PB8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 AC018553.1-201ENST00000616682 1458 ntBASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC3BQ96PB8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 AC079834.2-201ENST00000609776 1949 ntBASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC3BQ96PB8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 NAPSB-206ENST00000562112 1266 ntBASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 AC073508.3-201ENST00000619697 1419 ntBASIC20.4■□□□□ 0.86
LRRC3BQ96PB8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC3BQ96PB8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 KRT18P57-201ENST00000443599 1254 ntBASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 AC011506.1-201ENST00000474329 610 ntBASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 AL445675.2-201ENST00000620291 557 ntBASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.39■□□□□ 0.85
LRRC3BQ96PB8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms