Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 GUSBP5-201ENST00000418136 578 ntBASIC17.1■□□□□ 0.33
CMTM3Q96MX0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 MIR572-201ENST00000384983 95 ntBASIC17.09■□□□□ 0.33
CMTM3Q96MX0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 KRT87P-202ENST00000534226 1464 ntBASIC17.09■□□□□ 0.33
CMTM3Q96MX0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMTM3Q96MX0 AIRN-201ENST00000601203 4374 ntBASIC17.09■□□□□ 0.33
CMTM3Q96MX0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMTM3Q96MX0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 PGM5P4-201ENST00000421970 445 ntBASIC17.08■□□□□ 0.32
CMTM3Q96MX0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 AC243732.1-201ENST00000612648 864 ntBASIC17.08■□□□□ 0.32
CMTM3Q96MX0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 AL049812.1-201ENST00000432563 2267 ntBASIC17.08■□□□□ 0.32
CMTM3Q96MX0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.08■□□□□ 0.32
CMTM3Q96MX0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 TSPY26P-201ENST00000476365 1326 ntBASIC17.07■□□□□ 0.32
CMTM3Q96MX0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CMTM3Q96MX0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms